Pseudomonas frederiksbergensis: PFAS1_28765
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Entry
PFAS1_28765 CDS
T04786
Name
(GenBank) 4-hydroxy-2-oxovalerate aldolase
KO
K18365
4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:
4.1.3.39
4.1.3.43
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00362
Benzoate degradation
pfk00621
Dioxin degradation
pfk00622
Xylene degradation
pfk00984
Steroid degradation
pfk01100
Metabolic pathways
pfk01120
Microbial metabolism in diverse environments
pfk01220
Degradation of aromatic compounds
Module
pfk_M00569
Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PFAS1_28765
00622 Xylene degradation
PFAS1_28765
00621 Dioxin degradation
PFAS1_28765
00984 Steroid degradation
PFAS1_28765
Enzymes [BR:
pfk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
PFAS1_28765
4.1.3.43 4-hydroxy-2-oxohexanoate aldolase
PFAS1_28765
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
DmpG_comm
Motif
Other DBs
NCBI-ProteinID:
APV43309
UniProt:
A0A1H4IC65
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All DBs
Position
unnamed:complement(30919..31959)
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AA seq
346 aa
AA seq
DB search
MNLHGKSVILHDMSLRDGMHAKRHQISLEQMVAVATGLDQAGMPLIEITHGDGLGGRSIN
YGFPAHSDEEYLRAVIPQLKQAKVSALLLPGIGTVDHLKMALDCGVSTIRVATHCTEADV
SEQHIGMARKLGVDTVGFLMMAHMISAEKVLEQAKLMESYGANCIYCTDSAGYMLPDEVS
EKIGLLRAELNPATEVGFHGHHNMGMAIANSLAAIEAGAARIDGSVAGLGAGAGNTPLEV
FVAVCKRMGVETGIDLYKIMDVAEDLVVPMMDQPIRVDRDALTLGYAGVYSSFLLFAQRA
EKKYGVSARDILVELGRRGTVGGQEDMIEDLALDMARARQQQKVSA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgcacggcaagagcgtcatcctgcacgacatgagcctgcgcgacggcatgcac
gccaagcgccaccagatcagcctggagcagatggtcgcggtcgccaccggcctcgatcaa
gccggtatgccgctgatcgagatcacccacggcgacggcctcggcggtcgttcgatcaac
tacggcttcccggcccacagtgacgaggagtacctgcgcgcggtgatcccgcagctcaag
caggccaaagtctcggcgctgctgctgcccggcatcggcaccgtcgaccacctgaagatg
gccctggactgcggcgtctcgactattcgcgtggccacccactgtaccgaggcggatgtc
tccgagcagcacatcggcatggcgcgcaagctgggggtcgacaccgtcggcttcctgatg
atggcgcacatgatcagcgccgagaaagtcctggagcaggccaagctgatggaaagctat
ggtgccaactgcatctactgcaccgactcggccggctacatgctgcctgatgaagtcagc
gagaaaatcggcctcctgcgcgccgagctgaacccggccaccgaagtcggcttccacggc
caccacaacatgggcatggctatcgccaactcgctggccgccatcgaagccggtgccgcg
cgcatcgacggctcggtcgccggcctcggcgccggtgccggcaacaccccgctggaagtg
ttcgtcgcagtgtgcaaacgcatgggcgtggagaccggcatcgacctgtacaagatcatg
gacgtggccgaggacctggtggtgccgatgatggatcagccgatccgcgtcgaccgcgac
gccctgaccctgggctacgccggggtgtacagctcgttcctgctgttcgcccagcgcgcc
gagaagaaatatggcgtgtcggcccgcgacatcctggtcgaactgggccggcgcggcacc
gtcggtggccaggaagacatgatcgaagacctcgccctggacatggcccgggcccgtcag
cagcagaaggtgagcgcatga
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