Pseudomonas protegens Pf-5: PFL_4653
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Entry
PFL_4653 CDS
T00249
Name
(GenBank) coenzyme F420-reducing hydrogenase, beta subunit-like protein
KO
K00441
coenzyme F420 hydrogenase subunit beta [EC:
1.12.98.1
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00680
Methane metabolism
pfl01100
Metabolic pathways
pfl01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
PFL_4653
Enzymes [BR:
pfl01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.98 With other, known, physiological acceptors
1.12.98.1 coenzyme F420 hydrogenase
PFL_4653
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Gene cluster
GFIT
Motif
Pfam:
FrhB_FdhB_C
FrhB_FdhB_N
Fer4_21
Fer4_7
Fer4_9
Fer4
Fer4_10
Fer4_6
Fer4_8
Fer4_2
Fer4_15
Fer4_17
Fer4_16
ACDC
Fer4_4
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
AAY93900
UniProt:
Q4K7P6
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All DBs
Position
complement(5371150..5372358)
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AA seq
402 aa
AA seq
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MLLKLTVLDQNLCAGCGACALVCPQQVIVFDPDRVVPLLEGIGDSCESCTECLAVCPGLQ
PDTDRSELELFGRTRRAEERWLGISRQAIGARSTDPQIVRRSASGGTATTLLLTAREHFD
VDLTLTMGRHPGQGWRSAPQLGSAAAAIINNAQSTYQLAPYLNALRECYEQQPDARIAVV
GLACHVQAIRKLQRRDTAIGHWARSRIICVIETACSSNTLPAGTHSIISEVLGQDPQQVR
DIKYREGDYPGRLQVTLLDSQTFGIDFWEILGKLKDNKTFRCLSCGDWMSGLADVSVCDG
DPNIFEASLNGSEEQKHGRALIRTEMGQALVDSAITHGRLESWGVDLGGFNLGLERKKNR
RRFYETQPLVLPAGPGVGDHFEDEALVDDAELINPAKYRSSP
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgttattgaaattgacggtgctcgatcagaatctgtgcgccgggtgcggcgcctgcgcc
ctggtgtgcccacagcaggtgatcgttttcgacccggaccgggtggtgccgctgctggag
ggcatcggcgacagttgtgaaagctgcaccgagtgcctggctgtgtgcccggggctgcag
ccggataccgatcgctccgaactggaactgttcggccgtacccgccgcgccgaagagcgc
tggctggggatcagccgccaggccatcggtgcgcgttccaccgacccgcagatagtccgg
cgctcggccagtggcggcaccgccaccaccttgctgctgaccgcccgggagcactttgac
gtggacctgaccctgaccatgggccgtcatccagggcagggctggcgcagcgcgccgcaa
ctgggcagcgctgcagcggcgatcatcaacaatgcccagtccacctaccagctggcgcct
tacctcaatgccctgcgcgaatgctacgaacagcagccggacgcgcgcattgccgtggtg
gggctggcctgccacgtccaggcgatccgcaagctgcagcgccgggacacggccatcggc
cactgggcccgcagccgaatcatctgcgtgatcgagaccgcctgctcctccaacaccctg
ccggccggcacccacagcatcatcagcgaggtgctggggcaagacccgcagcaggtgcgc
gatatcaagtaccgcgaaggcgattaccccggccggctgcaagtcaccttgctggacagc
cagacctttggcatcgatttctgggagatcctcggcaagctcaaggacaacaagaccttt
cgctgcctcagttgcggtgactggatgagcgggctggccgacgtcagcgtgtgtgacggc
gaccccaacattttcgaagccagcctcaacggttccgaagaacagaaacacggccgcgcg
ctgatccgcaccgagatgggccaggccctggtggacagcgccatcacccatggccggctg
gaaagctggggagtcgaccttgggggcttcaacctcggccttgaacgcaagaagaaccgt
cggcgcttctatgaaacccagccgctggtgttgcccgccggccccggggtgggcgaccac
ttcgaggacgaagcgctggtggacgacgccgaactgatcaaccccgccaaatacaggagt
agcccatga
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