Pseudomonas protegens Pf-5: PFL_5055
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Entry
PFL_5055 CDS
T00249
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00540
Lipopolysaccharide biosynthesis
pfl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PFL_5055 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pfl01005
]
PFL_5055 (lpxC)
Enzymes [BR:
pfl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
PFL_5055 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
pfl01005
]
Lipid A
PFL_5055 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AAY94283
UniProt:
Q4K6J9
LinkDB
All DBs
Position
complement(5815765..5816676)
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AA seq
303 aa
AA seq
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MIKQRTLKNIIRATGVGLHSGEKVYLTLKPAPVDTGIVFCRADLDPVVQIPARAENVGET
TMSTTLVNGDVKVDTVEHLLSAMAGLGIDNAYVELSASEVPIMDGSAGPFVFLIQSAGLE
EQDAAKKFIRILREVTVEDGDKRATFVPFDGFKVSFEIDFDHPVFRDRTQSASVDFSSTS
FVKEVSRARTFGFMSDIEYLRKHNLALGGSVENAIVVDSDGVLNEDGLRYEDEFVKHKIL
DAIGDLYLLGNSLIGEFKGFKSGHALNNQLLRKLIEQKDAWEVVTFEDASTAPISYMRPV
AAV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacaacgcaccctgaagaatattatccgtgccacaggtgtaggcctgcattcc
ggggagaaggtatacctgaccctcaagcctgcgcctgtcgacaccggcattgtgttttgt
cgtgccgacctggaccctgtggtgcagattcctgctcgcgcggaaaatgttggcgaaacc
acgatgtcgaccactctggtcaacggtgacgtcaaagtggacacggtggagcacttgctc
tcggccatggctggcctgggcatcgataacgcctacgtcgagctctccgcgtctgaagtc
ccgatcatggatggcagtgccggacccttcgtattcctgattcaatctgctggcctcgaa
gaacaggacgcagctaaaaagttcatccgcatccttcgtgaagtgaccgtggaagacggc
gacaagcgcgccactttcgtgcctttcgatggttttaaagtgagcttcgagatcgatttc
gatcacccggttttccgtgaccgcacccagagtgcaagcgtggacttctccagtacttcg
tttgtaaaagaagtcagccgcgcccgtacctttggtttcatgagtgatatcgagtacctg
cgcaagcacaacctcgcactcggcggcagcgtggaaaacgcaattgtggtcgattcggat
ggcgtactgaatgaagacggtcttcgctacgaagacgaattcgtcaagcacaagatcctg
gatgcaattggcgacctctacctgctgggcaacagcctgataggtgagttcaaaggcttc
aagtcgggccatgcactgaacaaccagctactgcgcaagttgattgagcagaaagatgcc
tgggaagtcgtgaccttcgaagatgccagcactgcaccgatctcttacatgcgtccggtt
gcggccgtgtaa
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