Ptychodera flava: 139115842
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Entry
139115842 CDS
T10724
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
pfll Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pfll04040
]
139115842
Ion channels [BR:
pfll04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
139115842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_5
Ank_3
PKD_channel
Laminin_II
Ank_4
Snapin_Pallidin
BLOC1S3
DUF1664
Herpes_UL14
Prominin
Nup54
DUF3450
COG5_N
Apolipoprotein
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
139115842
NCBI-ProteinID:
XP_070534325
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All DBs
Position
17:complement(24315991..24336027)
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AA seq
1043 aa
AA seq
DB search
MAESKEELEQMYLISAEKGDLQVLETTLIRESEFDVNVRDSKGRSALELAIEKGLIDVVR
MLLKHPIDIGDSLLLAIENKFFKAAQAIVENSQGENVIDAHPVYNTEDYHPDTTPIILAA
HRNDYDTIKLLMLKGAPPIDLSTIQSEKHTVQRSVGTLNIYRALASEAYLSYIEIEKKEN
SDPFGRAFELSVELRELSSLEYEFRQDYTELAERCAQFAADLLGQTRDASELSTVLNHSS
RENGCGGQSMGLPSKVYDAVKGVQKQFVAHPYCQQELIERWYRGLTDWRDKSSIRNILLS
TLIMLVSPFLSLIYIIYPFGKFGDFMRIPYVKFLTHTASYLYFVLVLILSTLDLGSYNAE
SELGRLEEKQMRNQLRGSEPYILEWILIIWVVGMVWAEIKALWQSSFREYFSDTWHWFNV
VQLGLYVSWICLRIVAYIMVREERNSQQHQPDASTTGPIDVGGMQTTSVSDYVSIGATTS
VFQTTRSVDNITAEVANNVSELIATVLPTVSPSSTAGTATQAADIVVGEPTARSHGFDSS
AYSGYAYSIPRSEWSSSDPTLIADCVVALANVVSIVKFLRIMVINDYVGPLQISVSKMMN
DIIQFMFVFIVIWFAFALGLTQIYWLYSASDKVDCLREGGSSHSCGRQPFADIGSALGSL
FWSLYGLVDLETLFVSAEHESTELFGTILYGGYNVIAIIILLNLLIALMGTTYTNVSEHA
DVEWKFSRSELWMDYFKHGTTLAPPFNLIPTPKSLVRLAQYLINNLCCRTCDKKVNWVKS
HKETVVNVNYKEVCKQLVQRYFSEKASEARDSGDGNAVKEDLVAIKQDLSSLRYDIYGIR
QRVQKVSEDFNQKSDIINDGVQGARSDIERNKLQDNEVLKESRIEILGSTEQGNTLLTIL
EEGLSRFKSELKERHESRNEMLFDRFKSLHSDFQQGREESTEVMREVQGQIDGNIKKSKR
RLTSVDERLATIQTRLEEQENISRVVADSVKELAKSIDQMTSQIVPPRQRSGRRVTDIIQ
RIESNQSLGDDTPAEDDDPVFSL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatcaaaggaagagctagagcagatgtacctgatatctgccgagaagggagat
cttcaggtgctggaaacgactctgatcagagagtctgaattcgatgtcaatgtgagagac
agcaaaggaaggagcgctcttgaattggccatagaaaagggactgatagatgtagtccga
atgcttttgaagcatccgatcgatattggagattctctgctgctggccattgaaaacaaa
ttcttcaaggccgcacaagcaatagttgagaactcacagggggagaatgtgattgatgct
catcctgtgtataacactgaagattatcatcccgacactacgccaataatacttgcagct
catcgaaacgattacgatacaattaagcttttaatgttgaagggagcgccccctatcgac
ctgtcaacaatccaaagcgagaagcacacggtgcagcggtcagttggaactctgaatatc
tacagggctctcgccagcgaggcatacctatcgtacatcgaaatcgagaaaaaagaaaac
tcagatccattcggtagagcctttgagttgtctgtagaattgcgcgaactgagctccttg
gagtacgagttccgtcaagactacactgaactggccgaaagatgcgctcagtttgctgcc
gatctgctcggacaaactcgtgatgccagcgaacttagcactgtgttgaaccacagctcc
cgtgaaaatggttgcggtggtcagtcgatgggactaccctcaaaagtctacgatgcagtc
aaaggagtgcagaaacagttcgtggcgcacccctactgtcagcaggaactgattgaacgc
tggtacaggggcctgactgattggcgtgacaaaagctccattcgcaatatcctgctatcg
acattgataatgctagtctcgccattcctgagtctgatatatatcatctatcctttcgga
aaatttggcgatttcatgagaataccatatgtgaaattcctgacgcacaccgcatcatat
ctgtactttgttcttgtactgatactgtcaactctcgacttggggtcgtacaacgccgaa
agcgaattgggaaggttggaggaaaaacagatgcgaaatcagctgagaggatccgagcca
tatatacttgagtggattcttattatatgggtcgtaggtatggtctgggctgaaataaag
gctctctggcaaagcagttttcgcgagtatttcagcgacacatggcattggttcaatgtc
gtgcagctcggcctgtatgtgagttggatttgtctcaggatcgtcgcctacattatggtt
cgtgaagagcgaaacagccaacagcaccaacccgacgctagtaccacaggaccaatcgac
gtcggcggcatgcaaacgacgtctgtgagcgactacgtctcaattggtgccacaacatca
gtctttcaaacgaccaggtctgtcgacaacatcacggcagaagtcgcgaacaacgtgtcc
gagctgatagccactgtcctgcccacagtgtcgccatcatcaacggccggcacagctact
caagctgcagacatcgtggtcggtgagcccacagcgcgcagccatggcttcgacagcagc
gcatacagtggatatgcatactctatcccacggagcgaatggagctcttcggatccaaca
ctcatagcggactgcgtcgtcgctcttgcgaatgtagtgagcattgtcaaattccttcgc
ataatggtgatcaacgactatgtcggtcctctccaaatcagtgtcagtaagatgatgaac
gacatcattcagttcatgtttgtgtttatagtgatctggttcgcctttgctttgggctta
acacaaatctattggctctattcggcatctgataaagtggactgtttgagagaaggcggt
tcaagtcacagctgcggacgccagccattcgccgacatcggctccgctctggggtctttg
ttctggtcgctttatggcttggtcgaccttgaaacactgtttgtcagcgctgaacacgaa
tcgacagagctcttcggaactatactttacggcgggtacaacgtcatagccatcattatc
ctcctgaaccttctgatcgctctcatgggaaccacatacaccaacgtgtcggaacacgct
gatgtagaatggaaattttcgcggagtgaactgtggatggattattttaaacatggaaca
acccttgcgccaccattcaacttgataccgaccccgaagtcactcgtcaggttagcgcag
tacctcatcaataacttgtgctgtcgtacatgcgacaagaaagttaattgggttaaatcc
cacaaagaaactgtggtcaatgtgaactataaggaagtgtgcaaacagctcgtgcagagg
tacttttcggaaaaggctagtgaagcacgtgattccggtgacgggaacgctgtcaaggaa
gatctggtagctatcaaacaagatctatcttctttaagatacgacatatatggaatcaga
caaagagtccaaaaagtgtcggaagacttcaaccagaagagcgacataattaatgatggt
gtgcagggggcgaggtcagatatcgagagaaataagcttcaagacaacgaggtgctgaag
gaaagccgtattgagatcctaggttcgacggaacaaggaaacaccttgctgacgattctg
gaggaaggtttgtctcgcttcaagagcgaactgaaagagcggcatgaaagcaggaatgaa
atgttgttcgatcgattcaaaagcctgcattccgatttccaacagggcagagaggagagt
accgaagtcatgcgagaagtccaaggacagatagacggcaacatcaagaaaagcaaaagg
cgcctgacgagcgtcgacgagcgactggcgacgatacagacccgcttggaagagcaagag
aacatctcgcgcgttgtggcggatagcgtcaaggaactcgccaaatccatcgaccagatg
acatcccagattgtgccaccccgacaacgaagtggccggcgcgtaacggacattatccaa
cgcattgaatccaatcaaagtcttggagatgacacgccggcagaggatgacgatcctgtt
ttctcgttatag
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integrated database retrieval system
