Ptychodera flava: 139116604
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Entry
139116604 CDS
T10724
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
pfll Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pfll03036
]
139116604
03400 DNA repair and recombination proteins [BR:
pfll03400
]
139116604
Chromosome and associated proteins [BR:
pfll03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
139116604
DNA repair and recombination proteins [BR:
pfll03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
139116604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMCHD1_S5
Ig_SMCHD1_1st
Ig_SMCHD1_6th
Ig_SMCHD1_8th
Ig_SMCHD1_2nd
Ig_SMCHD1_4th
Ig_SMCHD1_5th
Ig_SMCHD1_7th
HATPase_c_3
SMC_hinge
HATPase_c
Col-Pyo_DNase
PRD
Motif
Other DBs
NCBI-GeneID:
139116604
NCBI-ProteinID:
XP_070535302
LinkDB
All DBs
Position
17:6569513..6606468
Genome browser
AA seq
2048 aa
AA seq
DB search
MAAKLTSPMPTSSFIMDEEDTVVYIYDRRRGSAPEKKIQLGGIFDFNTFRTKVCEILNMG
PRDKFVISTTNRMQINDDDTYEDLIEGGDTLYVLNHMNQELAAQAQERIEYLPHYDTLVK
SGMYEYYASEGQNPLPFAFAELIDNSLAATAGNIGPRSIEIRLFLDESPAKNQICVIDNG
CGMTSRQLNNWAIYRLSKFIRKEKKGQLQQIPSNLPTHDQEVPRSLNSDISYFGVGGKQA
IFFIGHSTRMISKPCDSKDVHELTISKEEFERREKNREAIYSGYIRNRKPGDSSHVASED
EIVHSLIKEEIGKRSFTAVIITGISPQHIQYLRNDFKGWCRHMVHIYHYYIHGPRGNEEK
MVGGYRPGSPFKNLDIEIVLYDKGKTPKQVNLRDINDDMQTRYIRSSADCFEFKAVVEGT
GIVEGIIRYHPFLYDRETFPSDYNGPKIDVDFEYEDIYMEDKPARGNRPIFECYWNGRLI
PYTFVYDFDWCAVPKKRGPVPIECYNRLSGVLWTNDKFQVSTNKLTFLDLEMKLKDKNTV
FYRIVQGQQQRVKIERAFTEWLKECHETQDKQVMFMKYQGSVSRPEIPVKRHQSPWAVYN
AIEWDAKVFEKGQLVRSIRTNPIIYGTIKRFLLFGHHEGDVFATGGEMEIIQEPQLLYDE
VKVVPLTKLDRVAPKSALKRYIEEEEGRLPEKLVLSWPEGDAITPGEKRPAGKTVGAIQV
EIQNRKRESISRLPGSIHSSKKLLMELKIIWHAPHGNEEIVSHISQHGKTWGYWFRKMEN
VKNLGYHTLKLQVVLNESGAKEFGGKELPSLKMKFLVTEAAPAKFSFGMMDPPFRMGEPF
DIPLEIHDEFGHPTKPSGDLKPVLEASGLDIEYSGLQSKGTSLIVKGVTAHGVVGSHQGT
SFHLKVTLPGIEEPTQTLKIRLQPGPPCSLHIIKPEDDDEIDIENGGPLSLEVEVRDKAG
NITTYPRLNVVCKLSGMPGLPTLSADCSHTGKAVLTCASVNIKNFKQDLKLNARVELQHY
KDIPHQERSVRVTPSTRVAGMEVSYTDADGEEHKIKNHQDLICTVENNSYRLYDEGSRLL
DITPDLANKVRVNWTPKFYKELLIKGQLPNIKIPSSVTETKYCQVSISSGFGVEFSFTLK
PNPGEPTQLKCTCKGSNKIQLGQKMDGDVVISITDSHGNPVRKQLPPKQTLAELQVFGTG
LVISEMIKAPYQTHGFILQNIKFAGVGLGNTELMVKWRDLSDYVKLQLVAGPPAKMAVVD
IPIDQPLLVYNDCKLEKPLILQLCDEADNPTTDPNAKVLLGKDPRLKLTPSPSQMKADSL
GRVNFGRFQVNAEKGQYELRPKALIGRVGIQGPVITIKVQPDPGKAVSVCVTYDRNAEFI
AGQMLPDFSVNVLAEDNSTITTADSKNIRMKIWQPGRLGDTTGRPPDKCLSFAPDARKAN
DAKGFFYFRSKKVPELAGAHQLIFQYTDSRTSLSSSTVVLNVHAGLPTKLLPVGIPGTPT
VSNTQKSASRVLIRSLKLQLKDDYGNDAGEKVNGKVQVSIESSSDKYELPKLVGNVSSIE
VILTKGAAILANLMIQENSPGRDGQEYIVRCQVVGAGLRDIEPYDQPFLFYNDAKKQYQM
GQLTKQRDELFQTIRTYNGFFETTQQLIKEMKISVHEAQTAEQQLRSELRRQNIPATQLG
NVASVDSLISQRMKEREELLNRPRRRCGLTAAPRDRNILGKIAHLSQIGDDDIARVLSWH
MASDMDCVVTRTNSKAIEVYRASNGRQQVLPLDSIYRKNLPDWNKPLPHLKGNRSHFKPS
GNPVFARNLLEFPADADECKIVFGMLLGDTIILDTLQDANEYRQEVVKITHCPTLLTREG
DRIRSNGKFGGMQNKALPLDKLKGAVFGAPLPIAYHAVCTQLETLQNYRQAMVKRLAADK
ELQEQLLNENTPEMKDKRKEYQEAEDHLRIIERKLGMTPTSNLSPGASPRGRIGSRALRQ
EPPPPFNADDDEPSNKRSRMSTRIATPPGTPLTNHNGPNSGSSTPTRLTRRSVPSPSPPV
LSKRTRRT
NT seq
6147 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaaactcactagccccatgccgacatcgtccttcataatggacgaagaagac
accgttgtatacatctatgaccgaagaagaggcagtgcaccagagaagaagatacagcta
ggaggcatcttcgatttcaacacatttcgcaccaaagtttgtgagattctaaacatgggc
ccgcgagataaatttgtgatctcgacaaccaatagaatgcaaatcaacgacgacgacact
tacgaagaccttattgaaggtggagacacattgtatgtgttgaatcacatgaatcaggaa
ctggcagcacaggcacaggaacgcattgaatacctgccacattacgatacattggtgaag
agtggaatgtatgaatactacgccagtgaaggacaaaacccactaccttttgcatttgct
gaactgatcgacaattcactggctgctacagctggcaatattggaccaagatcaattgaa
atcagattgttcctggatgaatctccagccaaaaatcaaatttgtgtcattgacaatgga
tgtggcatgacgtcaaggcagctcaacaactgggcaatctacagactttccaagttcatc
agaaaagaaaagaaaggacaactccagcaaattccaagcaacctaccaacacatgatcag
gaagtacccaggtcattgaacagtgatatctcatactttggtgtgggtgggaagcaggct
atattcttcattggacattcaaccaggatgatttcaaaaccatgtgattccaaggatgtc
catgagctgaccatctcaaaggaagaatttgagagaagagagaagaacagagaagccata
tacagcggctacatcaggaacagaaagcctggtgatagcagtcatgttgcttctgaagat
gaaatagtgcacagtttaatcaaagaggaaattggtaaacgcagctttactgctgtgatc
atcactggcatcagtccacagcatatacagtatctcaggaatgatttcaaaggatggtgt
cgacacatggtacacatatatcactactatatccacggacctcgcggtaatgaagagaag
atggtcggaggatacagacccggcagtccatttaagaaccttgacattgagattgtcctc
tatgacaagggcaaaacaccaaagcaagtcaacctgcgagacatcaatgatgatatgcag
accagatacatcagatcatcagctgactgctttgaattcaaagcagttgttgaaggcact
ggaattgtagagggcatcatcagatatcatccatttctctatgatagagaaacatttccc
agcgattacaatggaccaaagattgatgtagattttgaatatgaagacatttatatggag
gacaagccagcgaggggcaacagaccaatatttgaatgttactggaatggtagactcata
ccatacacttttgtatatgattttgactggtgcgctgtcccaaagaagaggggtccagtg
cctatagagtgttacaacagactctctggtgttctctggaccaatgataagttccaagtc
agtactaacaaattaaccttcctggacttagagatgaaactcaaggataagaatacagtc
ttctacaggattgtacagggacagcaacaaagagtaaagatagagagggccttcacagag
tggttgaaggaatgtcatgagacacaggacaagcaagttatgtttatgaagtaccagggc
tctgtaagcagacctgaaatcccagtgaaaagacaccaatcaccgtgggctgtgtacaac
gccattgaatgggatgctaaagtctttgagaaaggacagcttgttcgtagcatcaggact
aaccccattatttatggcaccataaagagattcctgttatttggacatcatgaaggtgat
gtctttgctaccggcggtgagatggaaataattcaggagccacagctgttgtatgatgaa
gtgaaggtagtgccactcaccaagctagacagagtggcaccaaagagtgctttgaagaga
tacatagaagaggaagaaggaagactgccagagaaactagtgctgtcttggccggaaggg
gatgccatcacgcctggtgaaaagagaccagctggaaaaactgttggtgccattcaagtt
gaaatccagaatcgtaaaagggaatccatttcaagacttcctggctccattcattcttca
aagaagctactaatggaactgaaaatcatctggcatgcaccccacggcaatgaagagatt
gtatctcacatcagtcaacacggcaaaacatggggatactggtttaggaaaatggagaat
gttaaaaatctaggctatcacacactcaagctgcaggtggtactcaatgaaagtggtgct
aaggagtttggtggcaaagagctgccaagtctgaagatgaaatttcttgtcacagaggca
gcaccggctaagttcagttttgggatgatggaccctccattccggatgggtgaaccgttt
gatatacctctggagattcatgatgagtttggtcacccgacaaagccgtcaggtgatctc
aaaccagtgctggaagccagtgggcttgacatagagtacagtggactgcaaagcaaaggt
accagtctgattgtgaagggtgtaacagcacatggtgtggttggatcacatcaaggaacc
tcattccatttgaaagtgacactgccaggaatagaggaaccaacacagacattgaagatc
agacttcaacctggtccaccatgttcactccacataatcaaaccggaggatgatgatgaa
atagacatagaaaatggaggtccgttgtcactggaggttgaagtccgcgacaaagctggc
aacatcacaacctatcctagactgaatgttgtgtgtaagcttagtggcatgccaggtctt
cctacactgagtgctgactgcagtcatacgggtaaagctgttctcacttgtgccagtgtg
aacatcaagaatttcaaacaggacctcaagctaaatgcaagagtagaattgcagcactat
aaagacattccacaccaggagagaagtgttcgagtcacacccagtaccagagtagccggc
atggaagtctcctacacagacgccgatggggaggaacataaaattaaaaaccatcaagat
ttaatttgtacagtggagaacaattcttacagactctatgatgaagggtcaaggctgttg
gatatcacaccagatttagccaacaaggtcagggtgaattggacacccaagttctacaaa
gagttactcatcaagggacaactgcccaacatcaaaatcccaagttcagtgacggagacc
aagtactgtcaagtcagcatatcatcaggctttggagtggaattctcatttacattaaaa
cccaatccaggtgaaccaacccagttgaagtgtacatgcaagggaagcaataaaatccag
cttggtcagaaaatggacggtgatgtcgtcatctcaataacagactcgcatggtaaccct
gttagaaagcagcttccacctaagcagactttagcagaactgcaagtctttggcactggc
cttgtcatcagtgaaatgataaaagcaccctaccagacacacggcttcattctacagaac
atcaagtttgctggtgttggactcggaaacactgaactgatggtcaagtggcgagactta
tcagattatgtcaagttacagctggtcgctggaccaccagctaaaatggctgttgttgat
atacccattgatcagccattgctagtgtacaatgattgcaaactagagaagccattgatt
cttcaactgtgtgacgaggctgacaacccaaccactgatcccaacgccaaggtgctgctc
ggaaaagatcccaggctaaagctgacaccatctccatcgcagatgaaggcagattcactt
ggaagggtcaactttggcagatttcaggtcaatgctgaaaaaggtcagtatgagctgagg
cccaaagccctgattggccgagtgggcatccaggggccagtcatcactatcaaggtacag
cctgaccccggcaaagccgtgagtgtgtgtgtgacctatgacagaaatgcagagttcatc
gcaggtcagatgctaccagacttcagcgtcaatgtcttagctgaggacaatagcacaata
acgacagcagacagtaaaaacatccgcatgaagatctggcaaccaggtagacttggagat
accacaggaagaccacccgataaatgtctgtcatttgcaccggatgcaagaaaagcaaat
gatgccaagggcttcttttatttcaggtcaaagaaagtaccggaacttgctggagctcat
caactcatattccaatacacagacagcagaacatcactttccagtagtaccgttgtattg
aatgtccatgctggtctcccaaccaagctgcttccagttggcataccgggtacacccact
gtatccaacacacagaaatctgccagcagagtacttatcagatctctcaaattgcaactc
aaggatgactatggcaatgacgctggagaaaaagtcaatggtaaagtacaagtctcaatt
gagagcagctctgataaatatgaactccctaagctagtgggaaatgtctcctccattgag
gtgatcctaacaaaaggagctgccatacttgcgaatttaatgattcaggagaactcacct
ggaagggatggtcaggaatacatagtcagatgtcaggttgtaggcgctggtctcagagac
attgaaccctatgatcaaccattcctgttctacaatgatgccaagaagcaatatcaaatg
ggacagttaacaaagcagagagatgaactcttccagacgataagaacatacaatggattc
tttgaaaccacacagcagctcatcaaagaaatgaaaatctctgtacacgaagcacagact
gcagaacaacaactgagaagtgaactcagaagacagaacataccagccactcaacttggc
aatgttgccagtgttgatagtctaatcagtcaaaggatgaaagaaagagaggaactcttg
aacagacccagacgacggtgtggactaacagcagcacctagagatagaaacatactggga
aagattgcccatctgtcccagattggagacgatgacatcgccagggtgttgtcatggcac
atggctagtgacatggactgtgtagtcaccagaactaacagcaaagccatagaagtctac
agagcctccaatggtagacagcaagtactgccactagactccatctacaggaaaaacctg
ccagattggaacaaaccactgccccacctcaaaggaaatcgttctcatttcaagccatct
ggaaacccagtctttgccagaaatttactggaatttccagcagatgctgatgagtgtaag
atagtgtttggcatgttgctaggagatacaatcatcctagatacactgcaagatgcaaat
gaatacaggcaagaggttgtcaagatcacacactgtccaactctgcttactagagaagga
gacagaataagaagcaatggaaagtttggtggcatgcagaataaagccctgccgttagac
aaacttaaaggagctgtgtttggggctcccttaccaatagcataccatgcagtgtgtaca
cagctagaaaccttacagaattacagacaagccatggtgaaacgcctggctgctgacaag
gagctgcaggaacagctgctgaatgagaacacaccggagatgaaagacaaacgaaaagaa
tatcaggaagccgaagatcatttgaggataattgagaggaaactcggtatgacccccacc
tctaacctttcacctggcgcttcacccagaggtcggattggctctcgggcgctgcgccag
gaaccaccgccaccattcaacgccgatgacgacgaaccatctaacaagcgctccagaatg
agcacccgcattgccacccctccaggcaccccactgaccaatcacaatggaccaaattca
ggcagcagcactcccaccaggttgaccagacgttcagtgccgtcgccctcaccaccagta
ctctcaaagcgcaccaggagaacatag
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