Ptychodera flava: 139131004
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Entry
139131004 CDS
T10724
Name
(RefSeq) F-box/WD repeat-containing protein 7-like isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
pfll Ptychodera flava
Pathway
pfll04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139131004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pfll04131
]
139131004
04121 Ubiquitin system [BR:
pfll04121
]
139131004
Membrane trafficking [BR:
pfll04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
139131004
Ubiquitin system [BR:
pfll04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
139131004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_EML
HHH_3
WD40_MABP1-WDR62_2nd
F-box-like
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_Nup120_160
HHH
Beta-prop_RIG_2nd
F-box
Beta-prop_EIPR1
Beta-prop_IFT140_2nd
T2SSK
WD40_like
Beta-prop_NWD2_C
Ge1_WD40
Beta-prop_VPS8
CDtoxinA
HHH_5
KNTC1_N
Beta-prop_RIG_1st
HHH_6
Motif
Other DBs
NCBI-GeneID:
139131004
NCBI-ProteinID:
XP_070552999
LinkDB
All DBs
Position
4:complement(16083307..16155502)
Genome browser
AA seq
855 aa
AA seq
DB search
MTSTRKVDINVASAEDLESLIGVGRAKAEAIIESRKALGSFNSIDDLTKVPGIGSSVVDQ
NRTVLTCSTRTNCSSNNSNSSRGGGSSSSSGSSRTSSSSSTSNKGSSSSTVTGRNCSTSS
AGHKSCSGVTAANKGAGNSSVSSKSSNSAAAQNRTSSSSTTTAAGHRGSSSSSVGGRSCS
TASSSSSSSRVSSSSGGGGSGSGSSSNSNMNRNNNPSSGSCKTVHTLHSCANCGNSTRRS
TTVTATTAHIPAGSVRRRFHSNDDNDDEDEPSPTTPRSAKTGAAAYTSKSVMKRKSDPGP
ESKGCSPGKKMCRTESHNSNLLTSCIHHHNYGTVKTSECQPPRRRLSSRVNPPPPELNEW
LKTFQNWSSAQRLMALDELINRCDPSQVRHVLSVIEPQFQRDFISLLPRELALYVLSFLE
PRDLLRAAQTCQYWRILCEDNLLWREKCKEAGIEEVNGKQTRRRSNSGVPRSPWKSAFMR
QHQIEYNWRFGEIRSPKVKKSSGHCLQPVVMVMRRICTVQVLKGHDDHVITCLQFCGQRI
VSGSDDNTLKVWSATTGKCLRTLVGHTGGVWSSQMSNNIIISGSTDRTLKVWNADTGQCI
HTLYGHTSTVRCMCLHSNKVVSGSRDATLRVWDIDTGQCLHVLMGHVAAVRCVQYDGRRV
VSGAYDYMVKVWNPETEECLHTLQGHTNRVYSLQFDGVHIVSGSLDTSIRVWDVETGECK
HTLMGHQSLTSGMELKDNILVSGNADSTVKIWDIQTGQCLQTLQGPNKHQSAVTCLQFNK
KFVITSSDDGTVKIWDLNTGEFIRNLVTLESGGSGGVVWRIRASQTKLVCAVGSRNGTEE
TKLLVLDFDVDEKRL
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaaccagaaaagtggacatcaacgtggcctcagccgaagatttagagagttta
ataggtgtcggacgggctaaggccgaggcaattattgaatctagaaaggcattgggcagt
ttcaacagtattgacgatctgactaaggtacctggtataggcagcagtgtcgtagaccaa
aacagaactgtcctgacctgtagtaccagaactaactgcagctctaataacagcaacagc
agcaggggtggcggcagcagctcaagcagcggctccagcaggactagcagcagctcatca
accagcaacaagggcagcagcagttcaacagtcactggtcggaactgcagcacttcctct
gccggtcacaagagctgcagcggtgtgaccgcagccaacaaaggcgctggaaattcaagt
gtaagcagcaagagcagcaactcggccgcagcccagaacaggacgagtagcagctcgact
acgacggcagctggccacaggggtagcagcagctcctccgtcggaggcaggagttgcagc
actgccagcagcagctcaagcagcagtcgagtcagcagcagcagcggcggcggtggcagt
ggcagtggcagtagcagcaactcaaacatgaacagaaacaacaacccatcttccgggtca
tgtaaaactgtacacaccctgcacagctgtgccaactgcggcaactcaacgcgcaggtcc
accacggtcactgcaaccaccgctcacatacccgcgggatcagtgaggaggcgtttccat
agcaatgacgacaatgacgatgaagacgagccctcaccgacaactccccggtctgcgaaa
accggtgctgctgcctacacatccaaaagtgtgatgaaaaggaagtcagatccaggccct
gaaagcaaaggctgctcacctggcaaaaaaatgtgtcgaactgagtcccataacagtaat
cttctcacttcctgtattcatcaccataactatggtactgtcaaaaccagcgagtgccaa
ccacccaggcggaggctgtcctccagagttaacccgccaccgccagaactcaacgaatgg
ctcaagacattccagaattggagttcagctcagagactgatggctcttgatgagctgata
aacagatgtgacccttcacaagtccgacatgtattgtctgtcatagagccacagtttcaa
agagattttatatcacttctccccagagagctcgccctgtacgtgctgtctttcctggag
ccgcgggacctactccgggcggcgcagacctgccagtactggaggatactctgcgaggac
aacctgctgtggagggagaagtgcaaggaagccggcatcgaggaagtcaacggcaaacag
acccggagacggtccaactcaggggtgcccaggagtccatggaagagcgccttcatgagg
cagcaccagattgagtataactggagatttggagaaattcggagccccaaggtaaagaag
tccagtggacattgcctccagccagtcgtcatggtgatgaggcggatttgcactgtgcag
gtgctgaagggtcatgatgatcacgtcatcacatgtctacagttctgtggtcagaggata
gtcagtggctctgatgacaacacactgaaagtgtggtcagctacaactggaaaatgtcta
cgtacgttagtaggacacacaggtggtgtgtggtcatcgcagatgtccaacaacatcatc
attagcgggtcgacagataggacattgaaagtatggaatgctgacacagggcagtgtata
cacacactgtatggacatacatccactgtcaggtgtatgtgtctacacagcaataaagtt
gtcagcggttcaagagacgccacgctacgagtgtgggatattgacaccggccagtgtcta
catgtactaatggggcacgtagcggctgtcaggtgcgtgcagtacgatgggcgacgggtc
gtcagtggggcgtacgattacatggtgaaagtgtggaacccagaaactgaggaatgtctt
cacactctacaaggtcacacaaatagggtttactcattacagtttgatggagtacatata
gtcagcggttcactggacacaagtatacgtgtatgggatgttgaaacgggggagtgcaag
cacacactgatgggacaccaatccctgaccagcggcatggaactcaaagataacattctg
gtctcaggaaacgccgattccacggtcaaaatatgggacatacagacgggacagtgtctg
caaactttacagggacccaacaagcaccagagtgctgtgacctgtctccagttcaacaaa
aaatttgtgatcacgagctctgacgatggaaccgtgaaaatctgggacctcaacacaggt
gaattcatcaggaatctcgtcaccctggagagcggcggcagtggcggcgttgtgtggcgg
atacgtgccagtcaaaccaaactagtgtgtgctgtcgggagcagaaatgggacagaagaa
accaaacttctagtgttagactttgatgtagatgaaaagaggctatga
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