Ptychodera flava: 139132862
Help
Entry
139132862 CDS
T10724
Name
(RefSeq) otoferlin-like isoform X1
KO
K19949
otoferlin
Organism
pfll Ptychodera flava
Brite
Membrane trafficking [BR:
pfll04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139132862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139132862
NCBI-ProteinID:
XP_070555279
LinkDB
All DBs
Position
5:6658781..6796910
Genome browser
AA seq
2315 aa
AA seq
DB search
MALVLHLKNAQFLKGRYDRQAKITFRGVSQLTQIVEHCEDEAIWDEKFEWPVASSIEKHE
AVEIVLLNHSKFRSNKVVGKFQMVLQQLVEDGQLNLTEPLLDANNTAISTTISLNLHYQA
PDGTVGDWMKEDFDYKLLPEDQVDNDNAFEEIIYDVNSLTSSSSKRGSRTSLNTVGTTRS
YTSSSTKKCASVGHYSIATTKSTSSKRSRKSVKSLGTTQSIKSIGKGMMGMMKLGKKRRP
RDDDSQALMGSRLSLADELDHIGPGDGEFHRMDDEGDAVSEAGFDSPKMSKKYAHKPPLE
QASLRLQDFQVSVTVIEARQLAGLNIDPLVCVTVGDSKKYTSVKQSTNCPYFNEYFVFDF
HVAPAMLFDKIIKLQVLHSRNVLRAGTVIGQFKFDVGTVYQAPDHMYYHKWAILTDPEDM
NGGCKGYLKVDISVVGKGDSLKVPAKVNDDEDDIESNLLLPEGIPAERQMGQFIVKVYKA
EGLPIMNSGMLANVKKVFTGEMKDLVDPYVQVNFAGQKARTTVKKHQYYPIWNEQIVFTE
MFPPLCRRMKLELRDKDSVLDDIIGTHFVDLSRISNEGECGFLPTFGPSWINLYGSLREY
SALDEHRQLNEGLGEGCMYRGRILVAVKAEVSDKSLESGSIGVEVEPALPISDSAAGRKE
EFFLFGCVMEAGMMEKKTAEKAVSFEISIGNQGNNMDGTNIHTKPKSFDSSESEEEEPKE
EKPKFNSTTESIKPVNSDNEKYYYHMPYNEKKPCVYVQFPWEDHRRRLYNQNILYKIADK
LEEGLGQVNEMLAKERPHPEKTFKQVMDDLSQACSLDQWQTLLDASNVSKLTKGTGGTSN
AGKTKLDKERHKLILREMEIMADTIEEVVYGPKAKNNTQNDDTSNSKGQKKRFRGLRNKN
KYLPEPTVTMPVPFDEDDHMSRQARAMKAGRSIVTPANLKEKMKAAYGFLRKLQHLAQEP
QHNVPDVFIWMFSGGKRIAYYRIPARKLLYSIVEEERGTHCGKVQTVFLRLPGKKGTGPA
GWTMQCKLQLYLWLGLTKHKKDFLSGLPGGFEMTKEIRQASKITATPPKHINYLEKQRFQ
LRAHMYQARSLVGSDASGLSDPFTRVVVANQMRSTQVIDETLSPTWDEMLVFDEIVIYGK
LEDVLENLPMVVIEVFDQDTVGKSEFIGRALANPVIKTVHDPYERPEFPPLLEWFNVYRG
QNPAGELLAAFELLQLPEPGDTRHDASLPPGVPPIDRTTDRGPIIPVPKGIRPNLSKHRI
EVLFWGVREMKRLQLTSVDRPRVDVECAGKVVSSTVIENTKKNPNFSQPVKFIEVELPER
EIYCPPINIRVVDCRTFGRFTLVGTHVITSIQKFRYIPKVKKTPQRALPGLADNDKEEPQ
STDNGPPQSNGDIKPEEQNNQNSQDDKVNANDTATNGQTLQAKPEGLTQQLAATHQAQGS
PAHLAPPAKPGDITISMESSPGPHQPLIKESTVISVPTDTPSKPEEPASPDTPDEGKDSK
KDKDSDNKKKKKDDKDGLDESTLDWWSKYFASKEALRKEQQKKQEELAETGGDLDALDLD
NQIPDTLTAVSGGTSDGQVPNGELQGDGVSFSVVNETGSNKGDISQDGKKFKTIATGVKI
ANRLSPKPQRKGKKSGISTLKDEPDIVNITIYPGELEQVPEFNGFREWLHTFELYRGKNT
GEGAEDNESRVVGKFKGSMMVYKWPLPDDIEDVTPFGTDPQFGFFQNLPNNDPIHVLVRV
YIVKAIDLHPADMNGKADPYLVLLLGKNKVNDKENYISKQLNPTFGKCFEFEATFPQESM
LTVQIYDWDLVGVDDLIGESKIDLENRYYSRHRAVCGISEEYAIHGYNTWRDPSKPTQVL
AKLCKDFKLDGPHYSHSKVKVADRTFTGRTDIEDENAVPAVAFANGHANGGQGTVQTSRL
QVPNLQVPHIDGVPQLNVDLHLPQLHHHEPMGHVTVNGKIFFAPIELKNSLGHKKPTDEH
LALEALKHWDEIPKGCKLVPEHVETRPLYNPNKPGIEQGKVEMWVDMFPMDMPSPGAPVD
ISPRKPKKYELRCIIWNTDDVILEDDAFFTGEKMSDIYVKGWLKGSQDDLQATDIHYRSL
TGEGNFNWRFIFPFEYLAAEEKIVISKKESLFSWDESEYKIPPRLNLQVWDADHFSADDF
LGAVTLDLNRFPRGAKNAKQCSLDMLKTDGSVPQVSLFKLKRIKGWWPFAAKGENEEETE
LTGKVEAELHLMSEEEAEKSPAGLGRSDPDPLEKPNRPDTSFVWFLNPLKAFKYMICVRF
KWLIIKALISALLIAIVVLFFYAMPGYTVKKMFNV
NT seq
6948 nt
NT seq
+upstream
nt +downstream
nt
atggcccttgttttacacctaaagaacgctcagttcctgaagggacggtatgacaggcaa
gcgaagatcacgttcagaggtgtgagccaactaacacagattgttgaacactgtgaagat
gaggccatctgggatgaaaaatttgaatggcctgttgccagtagcattgagaaacatgaa
gctgtcgaaatagtcttgttaaatcacagcaaatttagaagtaacaaggttgttggtaag
tttcagatggtattacagcagctagtggaagatggacaacttaatcttacagagcctcta
ttggatgcaaataatacagcaatatcaaccacaatttcacttaatttacactaccaagct
cctgatggtacagtgggagattggatgaaagaagattttgactacaaactactgccagag
gatcaggttgacaatgacaatgcatttgaagaaattatttatgacgttaacagccttacc
agtagcagttccaagagaggatcaagaaccagccttaatacagttggaacgacgagaagt
tataccagtagcagtaccaagaaatgtgcaagtgttggtcattattctattgcaacaaca
aagagcacttctagcaaaagatccagaaagagtgtgaagtctttgggtacaactcaaagt
atcaagagcattggtaaaggcatgatgggtatgatgaagctaggaaagaagagacgtccc
agagatgacgacagccaagcactgatgggcagtagactgagtttagctgatgaacttgat
catattggaccaggtgatggagaatttcaccgaatggatgatgaaggggacgctgtgtct
gaagctggctttgactctcccaaaatgtctaaaaaatatgcacataaaccaccacttgaa
caagcctcactaaggcttcaagatttccaagtcagcgtcactgtcatagaagcccgtcag
ttggcaggattgaatattgaccctttggtgtgtgtgactgttggtgattccaagaaatac
accagtgttaaacaatcaacaaattgcccctacttcaatgagtactttgtatttgacttt
catgttgcaccagccatgttgtttgacaagataatcaaacttcaggttcttcattcccgc
aatgtcctccgggcaggaactgtgattggtcagtttaaatttgatgttggtacagtatac
caagctccagatcacatgtactaccacaagtgggccattttaacagacccagaagacatg
aatggtggatgtaaaggctacttaaaagttgacatttccgtagttggtaaaggtgacagt
ctcaaagtacctgccaaagttaatgatgatgaggatgatatcgagtctaatttgctgctt
ccggagggtattccagcagagagacaaatgggacaatttattgtcaaagtttacaaagca
gagggattacccatcatgaattctggaatgctggccaatgtcaagaaagttttcaccggt
gaaatgaaggatctagtggatccctatgtacaagttaactttgccggacagaaagctaga
actacagtcaagaaacatcaatattatccaatatggaatgaacaaatagtgttcactgaa
atgttcccaccactctgcagacgaatgaagcttgaattacgtgacaaagacagtgtcctt
gatgacattataggcacacattttgtggatttgagccgcatatcaaatgaaggggagtgt
ggttttctaccaacatttggaccaagctggatcaatttgtatggctccctacgtgaatac
agtgcactggatgagcataggcagttgaatgagggcttgggagaagggtgtatgtacaga
ggaaggatactagttgctgtgaaagctgaagtgtccgataaaagtctggaatctggaagt
attggtgttgaagtggaaccagcacttcctatatcagatagtgctgctggtaggaaggag
gagttctttctctttggttgtgtcatggaagctggaatgatggagaaaaagacagctgag
aaagctgtcagctttgaaatcagcattggtaaccagggaaacaacatggatggtaccaat
atccacaccaaaccaaagtcatttgattcaagtgaaagcgaagaggaggaacctaaagaa
gagaaacccaaattcaattcaacaacagaatcaattaaaccagtgaacagtgacaatgag
aaatactactatcacatgccatacaatgagaaaaagccgtgtgtgtatgtacagtttcct
tgggaagaccacagaagacgactttacaatcagaatatcctgtacaagatagctgataaa
ctggaggaaggtcttggtcaagtgaatgaaatgttagccaaggaaagaccccatccagag
aagacattcaaacaggtcatggatgatctcagtcaagcttgcagcttggatcagtggcag
actcttctagatgccagtaatgtgagtaaacttaccaaggggacaggaggtacatccaat
gccgggaaaactaaacttgacaaggagagacacaagctgattctaagggaaatggaaatc
atggctgacacaatagaggaagtggtttatggtccaaaagccaagaataacacacagaat
gatgacacatctaatagcaaaggccagaaaaagagattccgtggtctgcgcaataaaaac
aaatacttacctgagccaactgtcacaatgcctgttccatttgatgaagatgatcatatg
tcaaggcaggcccgtgcaatgaaagctggtaggtccattgttacacctgcaaatttgaaa
gaaaagatgaaagcagcttatggattcttgaggaaactacagcatcttgcccaagagccc
cagcataatgtaccagatgtatttatctggatgttcagcggtgggaagcgcatagcatac
taccggataccggccaggaaactcttgtattctattgtggaagaggaaaggggaacacac
tgtggaaaagtgcagactgtattcctgaggcttcctggtaagaaaggcacaggcccagcc
ggatggaccatgcaatgcaaacttcaactctatctttggttgggattaaccaaacacaag
aaagatttcctgagtggcttgcctggtggttttgaaatgactaaagaaattcgacaggct
tcaaagataacagccacaccgccaaaacacatcaactacttagaaaaacaaaggttccag
ctgcgtgctcacatgtaccaggcaagaagtttggttggttcagatgcttcaggactttca
gatcccttcacaagagtggttgttgccaatcagatgagatcaacacaggtaattgatgag
actctgagtccaacctgggatgagatgctagtctttgatgaaatcgtcatctatggaaag
ttggaagatgttctggagaacctacctatggttgttattgaagtttttgatcaagacaca
gtgggcaaatctgaattcatcggcagagctttagccaaccctgtgataaagacagtgcat
gatccatatgagagacctgagtttccacctctccttgagtggttcaacgtctatagaggg
cagaatcctgctggtgaactgcttgcagcctttgaattattacagttaccagagcctggt
gatacaagacatgatgccagtcttccaccaggggtgccaccaattgatagaacaactgac
agaggacccatcattcctgtaccaaaaggcatacgtccaaacctcagcaagcacagaatt
gaggtgttattctggggtgtacgtgaaatgaagagattacagctgacatcagttgaccga
ccaagagtagatgtggaatgtgctggaaaagttgtctcatcaacggtgattgaaaacacc
aaaaagaatcccaactttagccagccagtcaaattcattgaagtggaactgccagagcgt
gagatctattgtcctccaatcaacattcgcgttgttgactgccgcacatttggtcgcttc
acgctagtaggaactcatgtgatcacctcaatacagaagttcagatacatacccaaagtg
aaaaagacaccacagagagcactccctgggttggcagataacgacaaggaggagccacaa
agcactgacaacggcccaccacaatccaatggtgacattaaacccgaggaacaaaataat
caaaatagccaagatgacaaagttaatgctaatgatacagctactaatggtcaaacactc
caagcaaagcctgaaggtctgacacaacaactagctgccacacatcaagcccagggatct
ccagctcatttggcaccaccggctaaacctggtgatattactatctccatggaatcgtct
cctggtcctcatcaaccgttgatcaaggaatcaactgtcatcagtgtaccaacggacacc
cctagcaagcctgaagaaccagctagtcctgacacaccagatgagggaaaagacagcaag
aaggataaagactcagacaacaaaaagaaaaagaaagatgacaaagatggcttggatgaa
agtaccttagattggtggtcaaagtactttgcttcaaaggaggcattgagaaaggaacaa
cagaaaaaacaagaggaactggcagaaacaggtggtgatctggatgctttagacttggac
aatcaaattccagacaccctgactgcagtcagtggaggtactagtgatggacaggttcca
aatggtgaacttcaaggagatggtgtaagtttctctgttgtcaatgagaccggttctaac
aaaggagacataagtcaggatggaaagaaattcaaaaccattgccacaggagtgaagatt
gcaaataggttatcacccaagccacagagaaaaggcaagaaatctggaatttctacactg
aaggacgagccggacatagtcaacataacgatctaccctggtgaacttgaacaagttcca
gagttcaatggtttcagagaatggctgcacacctttgagttgtaccgtggcaagaataca
ggtgaaggagcagaggacaatgaaagcagagtggttggtaaattcaagggatcaatgatg
gtatacaaatggccactacctgatgacatagaggatgtcacaccatttggaacagatcca
cagtttggatttttccaaaaccttccaaataatgacccaatccatgtcttagtcagggtc
tatattgtgaaggccatcgatctccatccagctgacatgaatggcaaggctgatccatac
cttgtgttacttcttggaaagaataaagtgaatgataaggagaattatatatccaagcaa
ttgaatccaacatttggcaagtgttttgagtttgaagccactttcccccaggaatcaatg
ctgactgtccagatatatgactgggatttggttggtgtggatgacttgattggagagtcc
aagattgatctggaaaacagatactacagcagacacagagctgtgtgtggtatatctgag
gaatatgcaatccatggttacaacacttggagggacccgagtaaaccaacccaggtacta
gccaaactatgcaaagacttcaaacttgatggaccacactactcgcacagcaaggtcaaa
gtcgctgataggacattcactggcagaacagatattgaagatgaaaatgctgtcccagca
gtggcatttgcaaatggacatgcaaatggaggacagggcacagtacagacatcacgtctg
caggtacccaatctgcaagtaccgcatattgatggagtgccacagttaaatgtggatcta
cacctccctcagcttcaccatcatgaaccaatgggacatgtcactgtcaacggcaaaata
ttttttgcacctattgagttgaaaaacagtctaggtcataagaaaccaacagatgaacat
ttagcactggaggcactgaaacactgggatgaaattcccaaaggttgtaaattggtgcct
gaacatgtggaaacaagaccattgtacaacccaaataaacctggtattgaacagggtaaa
gttgagatgtgggttgatatgtttccaatggacatgccaagcccaggtgcacctgttgat
atctcaccaagaaaacccaagaagtatgagctgagatgtattatctggaacacagatgat
gtcatcttggaagatgatgcattctttaccggtgaaaagatgagtgacatctatgtcaaa
gggtggttgaagggaagtcaggatgacttgcaggcaactgatatccattacagatcactc
actggtgagggaaatttcaactggaggtttatatttccatttgaatacctcgctgccgag
gagaagattgtgatttccaagaaggaatctctcttttcttgggatgaatcagagtataag
attccaccaaggttaaatttacaagtatgggatgcagatcacttctcagctgatgacttc
ctgggggctgtaactttggatttgaatcgattcccacgcggtgcaaagaatgccaagcag
tgttctcttgacatgttaaagacagatggatcagttccacaggtatcgctcttcaaactg
aagagaatcaaaggatggtggccgtttgctgctaagggagaaaatgaagaagagacggaa
ttgacgggtaaagttgaagcagaacttcacttgatgtcagaggaagaagcggaaaagagt
ccagcaggtcttggacgaagtgatcctgatccacttgagaaaccaaaccgaccagacaca
tcgtttgtgtggtttctgaacccactgaaggccttcaaatatatgatttgtgtacgcttc
aagtggcttatcatcaaagccctgatctcagctctcctgattgccatcgtagtgctcttt
ttctatgccatgcctggatacaccgtcaagaagatgtttaacgtctaa
DBGET
integrated database retrieval system