Ptychodera flava: 139133042
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Entry
139133042 CDS
T10724
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
pfll Ptychodera flava
Pathway
pfll04120
Ubiquitin mediated proteolysis
pfll04140
Autophagy - animal
pfll04144
Endocytosis
pfll04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139133042
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139133042
04140 Autophagy - animal
139133042
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
139133042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pfll04131
]
139133042
04121 Ubiquitin system [BR:
pfll04121
]
139133042
Enzymes [BR:
pfll01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139133042
Membrane trafficking [BR:
pfll04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
139133042
Ubiquitin system [BR:
pfll04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
139133042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
TRAF3_RING
zf-RING_2
Sina_ZnF
zf-C3HC4_3
U-box
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
Glyco_hydro_53
Fib_alpha
DUF16
zf_UBZ
zf-TRAF_2
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
139133042
NCBI-ProteinID:
XP_070555543
LinkDB
All DBs
Position
1:complement(22195628..22240551)
Genome browser
AA seq
561 aa
AA seq
DB search
MSQRLESGMPTGPGPPSSMDPRYSMYTTTEETEGYDVQFVPALEQKYECPICLMALRDPM
QTECGHRFCRACIYRSIRDAGPKCPVDQSPLSKEKVFPDNFAKREILSLTVRCPNSGCTT
TLELRDLENHREECEFFTQSCPNGCGVAVSKHSMALHLQAECVKRSILCQHCHRPYIFDQ
AQLHRAECPELPVVCEYCGIQLPRREKQQHIDNQCLHAFVPCTYSSVGCNHKMKRKDLVD
HQQACMEEHLKLVTKTVGDLKIQIAGSGNDRIDSGPPHSWHHSTMQQQMGSSKKQLLRRP
IKSYWMPSDPSYEGHEMSGAYGIDSPRSDSIGSGEYHFYHSGHTGPSSYPQENRDLSLLR
EKLRHYEEHRVIQEQKILELQTKVQTQGQEIHSLNTKIQRLETMMSNGVFYWKIDRYSDI
QRKASTGETNVMHSPPFYTGYYGYKMCLRINLNGTPSAHGLYVSLFVHFMQGEWDDMLQW
PFSGKITLSILDQSDNMEAKQHLSETLIAKPSLAAFHRPVSNRNHKGFGYMEFAPLTQLE
SRVDQYIRNNSIVIKATVDPN
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagagattggagagtggcatgccaactggtcctggacctccgtcttccatggat
cccaggtacagcatgtacaccaccactgaggaaacagagggatatgacgtgcagttcgtg
cctgcccttgagcaaaagtacgaatgtcctatttgcctgatggcattgcgtgatccgatg
cagacggagtgtggacatagattctgcagggcatgtatttatcgctctatcagggatgca
ggtccaaagtgtccagttgatcaatcgccactttcaaaggaaaaggtttttccagataac
tttgccaagcgtgaaattctaagtctgacagtacgctgtccaaactcaggatgtactacc
actcttgaacttagggatttagaaaaccatcgagaggagtgtgagtttttcacccagagt
tgtcccaatggctgtggtgtagctgtctcaaaacattcaatggcgttgcatttacaagca
gaatgcgttaagagaagtatactctgccaacactgccatagaccgtatatctttgaccag
gcccaacttcacagagccgagtgtccggaattacctgtagtctgtgagtactgcggaata
cagttgcccaggcgggaaaagcagcaacacattgacaaccagtgcctccacgcgtttgta
ccctgcacgtacagcagtgtaggttgcaaccataagatgaaaagaaaagatttagttgat
caccagcaagcttgtatggaggaacatttgaaactggtcacgaagaccgtaggagatttg
aaaatacagattgcaggaagtggaaacgacagaattgattctggaccacctcactcttgg
caccactcaacaatgcaacagcaaatgggatcttctaagaaacagttgctacgccgaccg
ataaagtcctattggatgccaagtgaccccagctacgaaggtcacgaaatgtcgggggcg
tacgggatagattcgcctcgtagtgacagtattggatctggagagtatcatttctatcac
tcggggcacacggggccatcgtcctatccgcaggaaaaccgggatttgtcgctgctgcgg
gagaaactacgacattacgaggaacaccgggtgattcaggagcagaaaattctggagctc
caaaccaaggttcagacccaggggcaagaaattcacagcttgaacaccaaaattcagcga
cttgaaaccatgatgagcaatggggtgttctattggaaaattgacagatattctgatata
cagcgtaaggcgagcactggcgaaactaacgtcatgcatagcccgccattttatactggc
tactatggatataaaatgtgcttaagaattaatctgaacggcacgccatcagcccatggc
ttgtatgtttcattatttgttcatttcatgcaaggcgagtgggatgacatgttacagtgg
cccttctcgggcaaaattactctttcgatactggaccagagcgacaacatggaggccaaa
cagcacctgagtgaaacgttgattgccaagccgtcgctggcagctttccacaggccggtg
tccaatcgcaatcacaaaggtttcggctacatggagtttgcacccctaacccaactagaa
agccgagtggaccagtacattaggaacaacagtatcgttatcaaggcaactgttgatcca
aactga
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integrated database retrieval system
