Ptychodera flava: 139140282
Help
Entry
139140282 CDS
T10724
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
pfll Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pfll04040
]
139140282
Ion channels [BR:
pfll04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
139140282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ank_2
Ank
Ank_3
Ank_4
Ank_5
TRP_2
PKD_channel
Tetrabrachion
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
139140282
NCBI-ProteinID:
XP_070565528
LinkDB
All DBs
Position
9:20095092..20119733
Genome browser
AA seq
978 aa
AA seq
DB search
MADKRSSSTVEQLYLNAVERGDIRAVEKFLKDKSEFDINAVNTDGMTALHLAIESGSVEI
LKVLLNHGVDIGDSLFHAIEAKFDKAIELILAHPKGKGLINEHAGIENEEFHPDTTPIIL
AAHHNDYDVIKLLMKRGAPPIAVSSYKTENHTLQRSVGTLNVYKALASESYMSAMELEDE
DTDPFRRAFELCQELRKESSKEYEFREQYLELAEKCEQYAADLLGKTRDSSELQTILSHN
ADMEVKDIGKEERPTKVLYAVTKDQKKFVVHPHCQQQLITLWYCGLKDWRDKGWIRNMII
SLLIMLAFPFLCLGYLIVPFGKFGRFMRIPYIKFLMHTASYIWFLALLFFTTYHFDGSGE
DLSQLNDEERKIAELDIARRHSQQRGPPPTPVDWLVVIWVIGMTCRELREVWNSGVLDYM
TNAWNVMDILQLGLYWLMIALRLAAFILVHEERTGEGSVGKRAVSDDFGDGNDTLAIVQD
LLNGTADDIVDRISLLIDDIQSSPQYEAALANISERLSNIHDLVSGLADSGTTTLQAPTF
DFGEDSRFEDVSFSKPRSEWNEMDPTLLADCIIALANVISVIRFLRVMVINEYVGPLQIS
VGKMMNDIMKFMFIFILVWVAFALGLTQVYWSYAADTVYDCVTQEDKTYPECYEERYFPD
VVGSMRTLFWSLYGLIDLEALEVEDNHRSTEFFGGVLFAGYQIVAVIILLNLLIALMGTT
YDNIVQNADMEWKFSRSDMWMDYFRAGTTEPPPFNVLPSTRAIISTARRLYYCLRCKEDE
KAVAKLQRKMKSMNERKEKYKDVCRRLILRYVAEEKSTAADAGEGGYASAKSELSTVRFE
IYNAMQHLEKIFEQQTLEVANNLKTLSSALEDNNREQMKAMEEIKDQLKNIHKDSELKLG
DLGKRLSDEHKKLLDKPTGSLSDIFEPGVREVTITRTSKPPGPSPTPSSTPSSVPSSPRR
PKPGVAGEQDVKDEGPKE
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagagatcaagcagcactgtagaacagctttacttgaatgctgtggaaaga
ggcgatatccgtgctgttgagaagttcttgaaagataagtccgaattcgacatcaacgcc
gtaaacacagatggcatgactgctttgcacctggccattgaaagcggcagtgtcgaaatc
ttgaaagtgcttcttaatcacggtgtagatattggtgactcccttttccacgccatagaa
gcgaaattcgataaagctattgaattgatactggctcacccgaaggggaaaggcctgatc
aacgaacacgctggtatcgaaaacgaggaattccatccggatacaaccccgattattctt
gctgctcatcataatgactatgacgtcattaagttattgatgaagcggggcgctccaccg
attgcagtgtcgagctacaagaccgagaaccacacccttcaacgctctgttggtactctg
aatgtgtacaaggcactggccagcgaatcttacatgtctgctatggaacttgaggacgag
gacacagatccgtttcggagggcttttgagctatgccaagaattacgcaaagagagttcc
aaggagtatgagttccgtgaacagtatctcgaattggcggaaaagtgcgagcagtacgcg
gctgatttactgggtaaaacgcgtgattcgtccgagctccagaccattctcagccacaat
gcagacatggaagttaaggacatcggcaaagaagagcgaccgacgaaagtcttgtatgcg
gtaactaaagaccagaaaaagtttgtggtgcatccacactgtcaacagcagctgattaca
ttgtggtattgtggtctgaaagattggcgagataaaggctggatacgaaacatgattatt
tcattgctcattatgctggctttcccctttttgtgtctcggatacttaattgtgccattc
ggaaaatttggaagattcatgcgtataccatacattaaatttctcatgcataccgcatca
tacatctggtttctggcactattgttcttcaccacataccactttgacggcagcggcgaa
gatcttagccagctcaacgatgaagaaagaaaaatagcggagttggatatagcaagacgg
catagccagcaacggggacctcccccaacgcccgtcgattggctagtagttatttgggtc
attgggatgacttgtcgggaactacgggaagtgtggaactctggagtcctggactacatg
accaatgcctggaacgtgatggacatactgcagttaggactgtattggttaatgatcgca
ctgaggcttgccgccttcattctggttcacgaagaaaggacgggcgagggctcggtgggg
aagagggcagtgtctgatgacttcggtgacggcaacgacacccttgccatcgtccaagat
ctcctcaacggaactgctgatgatattgtggacaggatcagcctgttaatcgacgacata
cagtcgtcgcctcaatatgaggccgcattagccaacatctctgagagactgtcaaacatc
catgacctggtgtcgggtctggcggacagcggaacgacgacgctccaagcgccgaccttc
gactttggtgaggattccaggttcgaggacgtctccttctccaagccacgctcagagtgg
aacgagatggacccaacgctgctggccgactgcatcatcgctctcgccaacgtcatcagc
gtcatccgcttcctgcgggtgatggtgatcaacgaatacgtgggaccccttcagatctcc
gtcggtaaaatgatgaacgacatcatgaagttcatgttcatttttattttggtttgggta
gcctttgccttgggtttgacgcaggtctattggtcctacgcggcagacactgtatatgac
tgtgtcacacaagaggacaagacttacccagagtgctacgaagagcgctatttccctgac
gtggttggatcgatgagaacgctgttttggtcgctctacggattgatcgacctcgaagcg
cttgaagtggaggacaatcatcgctcgacggagttcttcgggggagtactgtttgcagga
tatcagattgtcgccgtcatcattcttctcaacctgttgattgctttgatgggtacaact
tacgacaatatcgtgcaaaacgcggatatggaatggaagttctcccgttctgacatgtgg
atggattatttccgagcaggtacaactgagccaccccctttcaacgttctgccgagtacc
agggccatcatcagcactgctcgacgcttgtactactgtcttcgctgtaaagaagatgaa
aaggcagttgcaaagctgcaacggaaaatgaaatctatgaatgaaagaaaggaaaaatac
aaggatgtttgcagacgattgattctgcggtatgttgccgaggaaaagtctaccgccgcc
gatgctggtgaaggtggttatgcttcggctaaaagcgaactgtcgaccgtcaggtttgaa
atctacaatgctatgcaacacttggagaagatattcgagcaacagacactagaggtagcc
aataacttgaagactttgagcagcgccctcgaggacaacaaccgtgaacaaatgaaagcc
atggaggagatcaaagaccaactcaaaaacatccacaaggacagcgaattgaaactcggt
gatctgggtaaacgtctctcggatgaacacaagaagctgctggacaaaccgaccggttcg
ctgtccgacatttttgaacccggagtgcgagaggtgacgattacgagaacgtcgaagcca
cccgggccatcgccaacgccttcctcgacaccttcctctgttccgtcgtcgccaaggaga
ccgaaacctggcgtcgctggcgagcaagatgtgaaagatgagggtccgaaagagtag
DBGET
integrated database retrieval system
