Pampinifervens florentissimum: G3M65_06585
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Entry
G3M65_06585 CDS
T11282
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pflo Pampinifervens florentissimum
Pathway
pflo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G3M65_06585 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pflo03400
]
G3M65_06585 (nth)
Enzymes [BR:
pflo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
G3M65_06585 (nth)
DNA repair and recombination proteins [BR:
pflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G3M65_06585 (nth)
Prokaryotic type
G3M65_06585 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
RecR_HhH
DUF2400
Capsid_pestivir
Ribosomal_S13
HHH_5
DUF6744
5_3_exonuc
Glyco_hydro_4
Motif
Other DBs
NCBI-ProteinID:
QID33454
LinkDB
All DBs
Position
complement(1123479..1124093)
Genome browser
AA seq
204 aa
AA seq
DB search
MVQEILLRLDKVFPDRLELNFSNPLELLVAVILAAQSTDKKVNQLTEKLFKKYRSCEDYL
KAPLEELERDISSINYYKNKAKFIKSACQHIVERFGGQVPDSMEALTSLPGIGRKSANII
LYNAFGKNEGIAVDTHVSRVSQRLGLTKEKKPEKIEKDLMKIVPREQWGKFSNLLVLLGR
YICTAQKPKHHECPLYDLCPSREL
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaggaaatccttttaaggcttgataaggtgtttccagatagacttgaactaaac
ttttcaaacccgcttgagctactggtggccgtcatacttgcagcacagtcaacagacaaa
aaggtaaatcaactgaccgagaaattatttaagaaatatagaagctgtgaagactatctt
aaagcacccttagaggagttagaaagggatataagctccataaactactataaaaacaag
gcaaagtttataaagtccgcctgtcagcatatagtggaaaggtttggaggacaagttcca
gacagtatggaagctctcacaagcctgcctggaataggcagaaaaagtgccaacattatc
ctatacaacgcctttggaaagaacgaaggcattgcggtagatacgcatgtgtcaagggtt
agtcaaagactgggtctaacaaaggagaaaaaacctgaaaagatagaaaaagacctaatg
aaaatagtcccaagggaacagtgggggaaattctctaacctccttgttcttcttggaagg
tatatatgcaccgcacaaaagcctaaacaccatgagtgtcctctttatgacctttgtcct
tcgagggagctatga
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