Perca fluviatilis (European perch): 120545472 Help Entry 120545472         CDS       T11622                                  Symbol traf2b Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism pflt  Perca fluviatilis (European perch) Pathway pflt04010   MAPK signaling pathway pflt04137   Mitophagy - animal pflt04141   Protein processing in endoplasmic reticulum pflt04210   Apoptosis pflt04217   Necroptosis pflt04621   NOD-like receptor signaling pathway pflt04622   RIG-I-like receptor signaling pathway pflt04920   Adipocytokine signaling pathway pflt05132   Salmonella infection pflt05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:pflt00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     120545472 (traf2b)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     120545472 (traf2b)  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     120545472 (traf2b)   09143 Cell growth and death    04210 Apoptosis     120545472 (traf2b)    04217 Necroptosis     120545472 (traf2b)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     120545472 (traf2b)    04622 RIG-I-like receptor signaling pathway     120545472 (traf2b)   09152 Endocrine system    04920 Adipocytokine signaling pathway     120545472 (traf2b)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     120545472 (traf2b)   09171 Infectious disease: bacterial    05132 Salmonella infection     120545472 (traf2b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pflt03019]     120545472 (traf2b)    04121 Ubiquitin system [BR:pflt04121]     120545472 (traf2b) Enzymes [BR:pflt01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      120545472 (traf2b) Messenger RNA biogenesis [BR:pflt03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      120545472 (traf2b) Ubiquitin system [BR:pflt04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     120545472 (traf2b) SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_4 zf-RING_5 zf-C3HC4_2 zf-C3HC4_3 zf-RING_6 zf-RING_2 RING_XB3-XBAT31 Sina_ZnF zf-RING_UBOX TRAFD1-XIAF1_ZnF zf-C3HC4_5 ATG16 Motif Other DBs NCBI-GeneID:  120545472 NCBI-ProteinID:  XP_039635749 LinkDB All DBs Position 17:20037864..20050223 Genome browser AA seq 520 aa AA seqDB search MARISLDCTNSLPGIPLSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCFKQLTSS GPKPCEACRQEEIYEEPISILNSNEAFPDNAAGREIASLPARCLNQGCDWTGSIKEYEAQ HEGRCEFERIQCEACQISILRTDKDRHNERECEARTLNCKYCKMTFNFKDIKAHDEICLK FPLQCKDCGKKKIPREKFNDHSKSCAKSKSACPFSDVGCKSVIDNGKLADHEHSSTMEHL RLLLPMVLSMARTRADAAAHGEWQEDSGLGLYRAPEEGVTMGSGAAASMQSVDVDKKVNA LENIVCVLNREVERSSVTLEAFSHQHRLDQEKIENLSNKVRQLERTVTMRDLQLSETEQL LRELQFCTYDGIFVWKISDFSRRRQDAVAGRTPAMFSPAFYSSKYGYKMCLRLYLNGDGT GRGTHLSLFFVVMRGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRPIS EMNIASGCPLFCPLAKLAGKSPYLRDDTIFIKAIVDLTGL NT seq 1563 nt NT seq  +upstreamnt  +downstreamnt atggcccgaatctcgttggactgcaccaactctttaccagggatccccctcagtgtgctg tcagtgcctatggagaataagtacaaatgtcagcagtgtctccaggtcctgaggaagcct gtccaggctcagtgcggccaccgcttctgtgtacactgcttcaagcagctcaccagttct gggccaaagccttgcgaagcctgccgccaagaggagatatatgaggaacctatttccatc ctaaatagtaatgaggcatttccagacaatgcagccggccgagaaatagcaagtctgcct gccaggtgtttgaaccagggctgtgattggacaggctcaataaaagagtatgaggctcaa catgaaggtcgttgtgaatttgagcggatacagtgtgaggcctgccaaatctcaatcctt cgtacagacaaggacagacataatgagagagaatgtgaagcacgaacgctcaactgcaaa tactgcaaaatgaccttcaactttaaagacatcaaggcccatgatgagatctgtctgaag ttccccttacaatgcaaggactgtggcaagaaaaaaatcccaagagaaaagttcaatgac cacagcaaatcctgcgccaagtcaaagagtgcctgtccattcagtgatgtgggctgtaaa tctgtgatagataatgggaagctcgctgaccatgagcacagcagcaccatggagcacttg cgtctgctgctgcccatggtgctgtccatggctaggacgcgtgccgatgctgctgctcac ggagagtggcaggaggactctggcctgggcctgtacagggctcctgaggagggggtcact atgggctctggagctgcagcctccatgcagtctgtggacgtggacaaaaaggtgaacgct ttagaaaacattgtgtgtgtcctaaaccgagaggtggagcgcagttcggttacattggag gctttctcacatcagcatcgtttagaccaggaaaaaattgaaaacctctccaacaaagtg cgtcagctagagcggacagtcaccatgagagacttgcagctgtctgaaactgaacagctg ttgcgagagctccagttctgcacctacgacgggatatttgtgtggaaaatctctgacttc tcacgccgcagacaggatgccgtggccggtcgaacacctgcaatgttctcaccagcattt tactccagcaaatatggctacaaaatgtgtctgaggctttatttgaacggcgacgggacg ggcagaggaacgcacctttcgctgttctttgtcgtcatgaggggaaagtgcgacgctctg ctcaaatggccattcagtcagaaggtgactctaatgctcttggatcagaacaacagggag cacatcatcgatgctttccgccccgatgtcacctccacctcctttcagcggccgatcagt gagatgaacatcgccagtggctgcccgctcttctgtccgctggctaaactggctggcaag agcccctatctgagagatgataccattttcatcaaagccatcgtagacctcacaggcttg taa

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