Perca fluviatilis (European perch): 120570580
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Entry
120570580 CDS
T11622
Symbol
rapgef4a
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
pflt Perca fluviatilis (European perch)
Pathway
pflt04081
Hormone signaling
pflt04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
120570580 (rapgef4a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
120570580 (rapgef4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflt04131
]
120570580 (rapgef4a)
Membrane trafficking [BR:
pflt04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
120570580 (rapgef4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
Vit_b-sht_shell
Mis12
Motif
Other DBs
NCBI-GeneID:
120570580
NCBI-ProteinID:
XP_039674908
LinkDB
All DBs
Position
12:17465228..17498084
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AA seq
1024 aa
AA seq
DB search
MVTAHTSSHSSESAEWIICLDKRPAERSGEDVDIILARLKNVKAFERFHPSLLQQICTCG
FYECLEKGITLYRQGDIGTSWYAVLSGSLDVKVSETASYQHAVTICTLGTGTAFGESILD
NTPRHATIVTREFCELLRIEQREFRSLWEKYHQCMAGLLAPPYGVMDSGCSGDRMPDKEN
ISNNSFVSVSKHQNKKSVIESPAKSHLKCISQVPSEKILRAGKILRNAILSRAPHMIRDR
KYHLKTYRQCCVGTELVDWQMQQSSCIHSRIQAVGMWQVLLEEGVLNHVDQELSFQDKYL
FYRFLDDEQEDASLPGEEERKESQEELQDTLLLLSQIGPDAHMRMILRKHPSERTADDLE
IIYEELLHIKALSHLSTTVKRELAGVLIFESHAKAGTVLFSQGEEGTSWYIILKGSVNVV
IYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTV
RLKEHGQDVLVLEKSLGSSRTSSHGASSSHYKYKVMSGTPEKILEHLLEMMRLDSQFTES
DSALDDYVLMHCVFIPNSQLCPVLMAHYHAQASQGSEQEKLDYTLNNKRRVIRLVMQWAA
VHGDHLQEEDVSVAFLEEFLMAVSNDAKAIPALRDQLKELERSVKRNTEDVRVSQKKHKV
LLRQFSMGDEKLQKRQPIKSNDEILLKVYCCDHTYTTIRVPVAASVREVIGAVADKLGSA
EDLLLVNLSSTGEKVIFKPNDVSVFSTLSINGRLFACRRDQLDSLTPLPEQEGSSTGLLA
GFELMSSKDVAYHMTSYDWELFHCVHELELIYHTFGRQNVKKTTVNLDLFLRRFNEIQFW
VITEMCLCSQLSKRVQLLKKFIKIAAHCKEYRNLNAFFAIIMGLSNPAVCRLRQTWEKLP
NKFKKFYSEFENFMDPSRNHRAYRLTVAKLEPPIIPFMPLLIKDMTFTHEGNKTFIDYLV
NFEKMRMIANTVKIVRYCRSQPFSPDSPLASKNPEVRTYVRQLNVIDNQRTLSQLSHGLE
PRRS
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggtaacagcgcacacttcttcacattcgtcggaatctgccgagtggattatttgtctg
gataagagaccagcagagcgctctggagaagatgttgacataatcctggcacgtctgaaa
aatgtgaaggccttcgagagattccaccccagtttgctgcagcagatttgcacgtgtgga
ttctatgaatgcttggagaaaggcatcaccttgtatcgccaaggagacattggcaccagc
tggtatgccgtcctctctggttcactggatgtcaaagtttcagagacagcaagttatcag
catgctgttactatatgcacgctgggcactggcacggcatttggggagtcaatcctggat
aacaccccccggcatgccaccattgtcacgcgggaattctgtgagctcctacgcattgag
cagagggagttcaggtctctgtgggagaaatatcatcagtgcatggctggcctgcttgcc
ccaccctatggtgtgatggacagtggatgtagtggtgacagaatgccggacaaagagaac
ataagcaacaactcatttgtttcagtctccaaacatcagaataagaagtcagtcattgaa
agtccagcaaaatctcatcttaaatgcatttctcaggtcccgtctgagaagatcctgcgg
gcggggaagattctccgtaacgccatcctctccagggcgcctcacatgatcagagacagg
aagtaccatttgaagacgtacaggcagtgttgcgtggggacagagttggttgactggcaa
atgcagcagagctcatgcatccactctcgtattcaggctgtgggcatgtggcaggtgctg
ctagaagaaggtgttctcaaccatgtggaccaggagctgagcttccaggacaagtacctt
ttctaccgtttcctggatgacgagcaggaggatgctagtttacccggcgaggaggagagg
aaggaaagccaagaggagctgcaggacaccctgcttctcctctcacagattggacctgac
gcccacatgaggatgattctgaggaaacatccctctgaaagaacagcagatgatttggag
atcatttatgaagagctgctccatataaaggccttatctcacctatccaccactgtaaag
agagaactggcaggagtgctgatctttgagtctcatgcaaaggcaggaacagtgttgttc
agtcagggggaggagggcacatcatggtacattattttgaagggctcagtcaacgttgtc
atctatggaaaaggtgttgtttgcactcttcatgagggagacgactttggaaagcttgct
ctagtcaacgatgccccccgagctgcctccattgttctgcgagaggacaactgtcacttc
ctgagagtcgacaaggaggacttcaacaggattttgagggacgtggaggccaacacggtg
cgtctgaaggagcacggtcaagatgttctggtgttagagaagagtctcggcagcagtcga
acctccagccatggagcctcgtcctcccattacaaatacaaggtaatgtcagggactccg
gagaagattttggagcacctccttgaaatgatgcgattggattctcaattcacagagtca
gactcagccttagatgactatgtgctcatgcattgtgtcttcatcccaaacagtcaacta
tgtccggtgttgatggcgcactaccatgcccaggcctcgcagggctctgaacaggagaag
ctggactatacacttaacaacaagcgcagggtgatccgcctggtgatgcagtgggctgct
gtacatggagatcacctgcaggaggaggatgtctctgtggctttcctagaggagtttctc
atggcggtatctaatgatgccaaagccattccagccctcagggatcaactaaaagaactg
gagagaagtgtaaagcgaaatactgaagatgtcagagtctcacagaaaaagcacaaagtc
ctactgcggcagttcagtatgggggatgagaagcttcagaaacgtcagcccatcaagagt
aatgacgaaattctgctcaaagtctactgctgtgaccacacctacacaacaatccgtgtc
cctgtggccgcctcagtcagggaggtcatcggtgctgtggccgacaagctagggtcggcg
gaggacctgctcctggtcaacctcagttcgacaggagagaaagtcatcttcaagcccaat
gatgtttcagtgttctccactctcagcataaatggacggctgtttgcctgccggagggat
cagttggattctttgacccctctacctgagcaggagggttcctctacagggctgttggcc
ggttttgagttaatgagttctaaggatgtggcttaccacatgacttcctatgactgggag
ctctttcactgtgtacatgagcttgaactcatctaccacacatttgggaggcaaaacgta
aagaaaaccacggtgaacctggacctgttcctgaggaggtttaatgaaattcagttttgg
gtgatcacagagatgtgtctatgttctcagcttagcaagagagtgcagcttctaaagaag
ttcatcaagattgcggcccactgcaaagagtacaggaatctgaacgccttctttgctatc
attatgggactgagtaacccagcagtgtgcagattgaggcagacctgggagaaacttccc
aacaaattcaagaagttttattcagaatttgaaaacttcatggacccgtccaggaaccac
cgggcgtaccgactgacagttgccaagctggagcctcccatcattcccttcatgccgctg
ctgatcaaagacatgacattcactcatgagggcaacaagacgtttatcgattatttggtc
aattttgagaaaatgcggatgatcgctaacacggtgaagatagtgagatactgtaggagc
caaccattcagtccagattcacctctggccagcaagaacccagaagttcggacttacgta
cgtcaactcaacgtgatcgacaaccaaaggacgctatctcagctctctcatggacttgag
ccccgcaggtcttaa
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integrated database retrieval system
