Perca flavescens (yellow perch): 114546085
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Entry
114546085 CDS
T07494
Name
(RefSeq) H-2 class II histocompatibility antigen, E-D beta chain-like
KO
K06752
MHC class II antigen
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04145
Phagosome
pflv04514
Cell adhesion molecule (CAM) interaction
pflv04672
Intestinal immune network for IgA production
pflv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
114546085
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114546085
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
114546085
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114546085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pflv04147
]
114546085
Exosome [BR:
pflv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114546085
Exosomal proteins of epithelial cells
114546085
Exosomal proteins of breast milk
114546085
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
Rhomboid
DUF2273
Acyl_transf_3
C2-set_3
Ig_3
Cation_ATPase_C
PMP22_Claudin
DUF2627
Motif
Other DBs
NCBI-GeneID:
114546085
NCBI-ProteinID:
XP_028420553
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Position
19:complement(311867..318380)
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AA seq
455 aa
AA seq
DB search
MTAWARERVKILVKMRVSWWVYTLSTLPGTLSGPAAFLGFTARSTRLTSCSLTVSGVVQE
PGGVGGRAGVAQEPDGVEAGLGQMSGAVVMSQSGSALSDTESVFVKRTEEHGFILSQGLL
LFIKTQQYFISLYTADGYLYYNTDRCDFNSSDLKDIEFIRSLYFNKMEIIRFSSSLGKFV
GYTEYGVKQAEYFNKDPSVLAQMRAQKERYCKRNVDIDYQNVLIKSAEPYVRLHSMAPPG
GKHPAMLVCSVYDFYPKQIRVTWTRDGQEVTSDVTYTDELADGDWYYQIHSHLEYTPRSG
EKISCIVEHASLKEPLITHWDQSMSKTDRNKILIGASGLILGLVVFLAGFLYYKRKARDL
SKSDSERNKIAFGASGLILGLALTAFFFYKRKAEDLSMLEFQRNKLIIVASGLILGLVLS
LAALIFYRRKTCGQIPGSKPVQTSSDQFKKADPTF
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgactgcctgggccagggagagggtgaagattctggtgaagatgagggtgagctggtgg
gtgtacaccctgagcaccttgccaggtactctgtctgggccggcagccttcctggggttc
actgcaaggagcacccgtctgacatcgtgctccctcacagtgagtggggtggtgcaggag
ccaggtggggtcgggggcagggctggggtagcacaggaaccagatggggtggaggcaggg
ctggggcagatgagtggtgctgttgtgatgtctcaaagcggatcagctctcagtgacact
gagtcagtgtttgttaagagaacagaggaacatggcttcatcctttctcagggtctcctg
ctcttcatcaagacacagcagtacttcatcagcctctacacagcagatggatatctgtat
tacaacacggaccgttgtgactttaactcgtctgatctgaaggacatcgagttcatcagg
tctttatatttcaacaagatggagatcatcaggttcagcagcagtttggggaagtttgtt
ggatacactgagtacggagtgaaacaggctgagtactttaacaaagatccttcagttctg
gctcagatgagagctcagaaggagagatactgcaaacgaaatgttgatattgactaccag
aatgttctgattaaatcagctgagccatatgtcagactccactctatggcgccccccggg
ggtaaacatccagccatgttggtctgcagtgtctacgacttctaccccaaacagatcaga
gtgacctggaccagagacggacaggaagtcacctctgatgtcacgtacactgatgagctg
gcagacggtgattggtactaccagatccactctcacctggagtacacgcccaggtctgga
gagaagatctcctgtattgtggaacacgccagcctgaaagaacctctgattactcactgg
gaccagtctatgtctaagactgacagaaacaaaatcctcatcggagcctcaggactgatc
ctgggtctggtggtctttctggctggattcctctactacaagaggaaggcccgagacctg
tccaagtctgattctgagaggaacaagatcgcctttggagcctcaggactgatcctgggt
ctggcgctaactgcattcttcttctacaagaggaaggccgaagacctgtccatgctggag
tttcagaggaacaagctcatcatcgtggcatcaggactgatcctgggtctggtcttatct
ctggctgcattaatcttctacaggaggaagacctgcggtcagattcctggttcaaaacca
gttcagaccagttcagaccagtttaaaaaggctgatcctaccttctag
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