Perca flavescens (yellow perch): 114546727 Help Entry 114546727         CDS       T07494                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism pflv  Perca flavescens (yellow perch) Pathway pflv04115   p53 signaling pathway pflv04145   Phagosome pflv04148   Efferocytosis pflv04350   TGF-beta signaling pathway pflv04510   Focal adhesion pflv04512   ECM-receptor interaction pflv04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:pflv00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     114546727   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     114546727  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     114546727    04148 Efferocytosis     114546727   09143 Cell growth and death    04115 p53 signaling pathway     114546727   09144 Cellular community - eukaryotes    04510 Focal adhesion     114546727   09142 Cell motility    04820 Cytoskeleton in muscle cells     114546727  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pflv04131]     114546727   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pflv00536]     114546727 Membrane trafficking [BR:pflv04131]  Endocytosis   Phagocytosis    Opsonins     114546727 Glycosaminoglycan binding proteins [BR:pflv00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    114546727 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_ADAMTS TSP1_CFP_C EGF_3 EGF_CA cEGF Laminin_G_3 EGF TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  114546727 NCBI-ProteinID:  XP_028421535 LinkDB All DBs Position 20:13829874..13839122 Genome browser AA seq 1172 aa AA seqDB search MMLGGIFLLLMLWSCEGARLAENRDDNSVYDLFDLARVNKRGNGVSLVKGEDPYSPAYKL LNADLIPPVPDSSFRDLLDSIQAERGFLLLVNLKQFKKSRGSLLTIEKNDGSGPVLEIIS NGKANTLDVVHSFMNQQQVVSIEDADLATGHWKNITLFIQDDRVQLYVGCEEINVSEMDV PIYRVLSQEVADIARLRIGKGAVRDKFKGVLQNVRFVFGTTLDAILRNKGCQSGATLTDV MTLDNPVNGSSPAIRTDYTGHKAKDLQSVCGFSCEDITGMFKELKGLGVVVKQLSNDLRK VSHESSLLKIQMNIHSGICIHNGIVHNDKDEWTVDGCTECTCQNSATVCRKISCPLIPCA NATVPDGECCPRCGTPSDYAEDGWSPWSDWTHCSVTCGRGIQQRGRSCDRINSNCEGTSV QTRDCYPMECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGSDCQGEG RQTEICQKSPCPINGGWGPWSPWNTCTVTCGGGVQIRKRLCSDPVPKYGGKDCVGDATVT QVCNKQDCPIDGCLSSPCFPGSKCTSFPDGSFQCGKCPLGYVGNGITCKDIDECEEVPDA CHTHNGVHRCENTEPGYNCLPCPTRFSGPQPFGKGVEQATAKKQVCKPRNPCQDGSHDCH KNANCIYLGVFSESMFRCECRPGYAGNGRICGEDSDLDGWPNTNLHCVENATYHCKKDNC PNLPNSGQEDHDKDGLGDECDHDDDNDGIPDDRDNCPKVYNPAQYDADRDDIGDRCDNCV YEANTDQTDTDNNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDRVGDHCDNCPL EHNPDQIDSDSDRIGDKCDNNQDIDEDGHQNNLDNCPYISNANQVDHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNVLDIHDVCPENFAISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFSAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYTVMWKQITQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGDTPGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGLYVFSQEMVYFSDLKYECRDT NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgatgctcggtggcatctttttgctgttgatgctttggagctgtgaaggcgcaagattg gcagagaatcgggatgataacagtgtgtatgacttatttgatctggcccgggtaaacaag agaggcaatggagtgagtttagtcaaaggtgaagatccctacagccctgcatacaagctc ctcaatgcagacctgatccccccagtccccgacagctccttcagggacctccttgactcc atccaggctgagaggggcttcctcctcctggttaacctgaagcagttcaaaaaatccagg ggcagccttttgaccatcgagaagaatgacggatccggacccgttttggagatcatctcc aacggaaaggcgaacactctggatgtggtccactccttcatgaaccagcagcaggtcgtg tccatcgaggatgctgatttggccactgggcactggaagaacatcacgctgttcattcag gatgaccgcgtgcagctttatgtcggctgtgaggagatcaatgtatcagagatggatgtg ccaatctacagagttctgtcccaagaggtggcagacattgccaggctcaggattggaaag ggagctgtcagggacaaattcaagggagtgcttcaaaatgtgcgctttgtatttgggacc actcttgatgccatactgagaaataagggatgccagagtggagctactttaactgatgtc atgacccttgacaacccagtcaatggctccagccccgctattaggactgattacaccggc cacaaagccaaagatctgcagtctgtttgcggcttctcttgtgaggacatcaccggcatg tttaaggagctcaagggactcggtgtggttgttaaacagctgtcgaatgacctccgcaaa gtgtctcatgagagttcactgctgaaaattcaaatgaacatccacagtggaatttgcatc cacaacggcatcgttcacaacgacaaagatgaatggaccgtggatggctgcacagagtgt acctgccagaactctgctacggtgtgtcgcaaaatctcctgccctctgatcccatgtgct aatgccaccgtgcccgacggagagtgctgccctcgctgtggaacaccgagcgactatgca gaggatggatggtccccctggtctgactggacccattgttcggtgacttgtggtcggggc atccagcagcgtggacgctcctgcgaccgaatcaacagcaactgtgagggcacctctgtc cagacccgtgactgctaccccatggaatgtgacaaacgcttcaaacaggatggtggttgg agccactggtctccctggtcttcgtgctctgtgacctgtggtgagggggtcatcacccgg atacgcctctgcaactcccccacaccccagatgggtggcagtgactgccagggagaagga cgtcaaacggagatctgccaaaagtcaccctgtcctatcaatggaggttggggaccgtgg tcaccatggaacacctgcactgttacctgtggtggaggagtccagatccgcaaacgtctc tgctctgaccccgtccccaaatatggaggaaaggattgtgttggagatgctactgtgact caagtgtgcaacaaacaggactgtcctattgatggttgtctctccagcccatgcttccct ggctcaaaatgcaccagcttccccgatggctctttccagtgcggcaagtgtccacttggc tacgttgggaacggcatcacatgcaaagacattgacgagtgtgaagaggtccctgatgct tgtcacacacataatggagtccatcgctgtgagaacactgaacccggctacaactgcctg ccctgccccacacgtttctcaggacctcagccctttggaaaaggagtggaacaggcaact gctaaaaaacaggtttgcaaaccccgtaatccttgccaagatggtagccacgactgccat aaaaatgcaaactgcatctacttgggcgtcttctctgaatccatgttccgctgcgagtgc aggccaggatatgccggaaatggccggatttgcggagaggatagtgacctggacggatgg cccaacactaacctgcattgtgtggagaacgccacctaccactgcaagaaggataactgc cccaaccttcccaactctggccaggaagatcatgacaaagatggcctgggtgatgaatgt gaccatgatgatgacaatgatgggatccccgatgatagggacaactgcccaaaagtgtac aaccctgcccagtatgacgcagacagagatgacattggcgaccgctgtgacaactgtgtg tacgaggctaacactgaccaaaccgacactgacaacaacggagagggtgacgcctgtgct gttgacattgatggcgatggcattctgaatgagaacgataactgcccatatgtttacaac gtggaccagagagataccgacagggacagggtgggagaccattgtgacaactgccctctg gagcacaaccctgatcagattgactctgactcagatcgcataggagacaagtgcgacaac aaccaggacattgacgaggacggtcaccagaacaacctggacaactgcccctacatatcc aatgccaaccaggtagaccacgacaaggatggcaagggtgacgcctgtgaccatgacgat gacaacgatggcattcctgatgacaaagacaactgtaggctggcatttaaccctgatcag ctggattctgatggtgatggccgtggtgacgtgtgcaaagatgattttgaccaagacaat gttttggacatccatgacgtgtgcccagagaactttgccatcagtgaaacagacttccgc agattccaaatggttcctttggaccccaagggcacctcccagattgaccccaactgggtg gtccggcatcagggcaaggagttggtgcagactgtcaactgcgatcctggcattgctgtt ggcttcgatgagttcagcgcggtggatttcagtggaacgttcttcatcaacacggacaga gatgacgactacgctgggttcgtgtttggctaccaatccagctcgcgcttctacactgtg atgtggaaacagatcacacagacctactggtctcacacacccacaagagctcaaggctac tctggcctgtcaatcaaagtggtcaactccaccaccgggcctggtgagcatctgaggaac gccctgtggcacaccggagacacccctggacaggtgcgcactctgtggcacgaccccaag aacattggctggaaggacttcaccgcctacagatggcatctgacccacagacccaagact ggtcttattagagtggtcatgtatgaaggcaagagaatcatggctgattctggaaacatt tacgacaagacctacgctggtgggcgactaggcttgtacgtcttctctcaggagatggtt tacttctcagacctcaaatacgaatgcagagatacataa

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