KEGG   Perca flavescens (yellow perch): 114550188
Entry
114550188         CDS       T07494                                 
Symbol
apaf1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
  KO
K02084  apoptotic protease-activating factor
Organism
pflv  Perca flavescens (yellow perch)
Pathway
pflv04115  p53 signaling pathway
pflv04210  Apoptosis
pflv05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    114550188 (apaf1)
   04115 p53 signaling pathway
    114550188 (apaf1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    114550188 (apaf1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 APAF1_C WDR55 NB-ARC WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 APAF-1-like_WHD Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML CARD WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st RMC1_N Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_EIPR1 Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C CARD_2 PROPPIN Beta-prop_VPS8 WD40_like WD40_RFWD3 Beta-prop_SPT8 AAA_22 AAA_16 nSTAND1 AAA_18
Other DBs
NCBI-GeneID: 114550188
NCBI-ProteinID: XP_028426596
LinkDB
Position
23:complement(9960116..10008709)
AA seq 1297 aa
MALEEGARSCLLRFRHRLEQDIKPSYLMDHMISDGVLTVNEEERIMNKPTRKDQAVALLE
LLLRKDNRGYISFYNALITEKYNDLANLLHDDLPQTLPGAYKSSSDGCTSYVQTVLSEGG
VPQRPVVFVSRPQFVNRVREKLYRLQKEPGWVTVFGMAGSGKSVLAAEAVRHHGLIEECF
PGGIHWLSIGQLDKPDLMVKIQSLCFRLEQSLDSPSLHRPPNSLDEAKERLRYLTLRRYP
RSLLILDDIWDSTVLKAFDIHCRILLTTRNRSLVDSVSGAKYEVEVESGLDEKKGLEILA
LYTNTKLHGLPEEARSIVKECKGSPLVVSLIGALLKEKPNRWRYYLNQLQQKQFKRIRKS
SSYDYDALDQAMDASIEVLPDEHRELYKDLSVLEKDIKVPAKVLSVLWDLEPEQVEDILE
EFVNKSLLFVDSNNKPYLYYLHDLQLDFLVEQNRTQLKSLHSKVVHQYQQHYRDGPPTSG
DEECLYWIRFLTHHMAKANLSQELYSLMFSLDWVSIKAQIMGPAHLINDYVEYGPILDKE
NSEVRSQFQEFLSLNGHQLEQRPFPDVVQLALSQPQTSEVYRQALLQAQGRASTGKLYFD
WLNKSSVENLSRLVIHPHQGSIYSACFSHDGAKIASSGASKTLKVFKSTSGEKLTEIQAH
DDEVLCCAFSPDDRLLATCSSDRKVKVWNVERSMLLRVFEEEHEEQVNHCQFTNTTQRVL
LATCSNDKFLNVKLWNLNKPSSQNTMFGHFEPVNHCCFSPDDTYLSTSSNDGTVKLFQLS
SANEWKTINVRDMFAESDEEVLVKCSTWTADGKHIICAARNAALVFDVETSDMLLEIRTN
RLSTVQYCHACSTSNLLAIAFSNYAVELWDLEANKKMADCSGHLSWVQRVQFSPDGSQLL
SCSDDQTVRLWETNKVHTSSAVCLKRDSDVLFYDEEIIVSAADNCNRLQVRDGRTGSVLF
QSEEKSSRIRCTCMCRQPSAVALGQEDGTVQTAGLTARKVLRTLGCRIQRLLTSFRGLIL
AVGLCTGSVQVLEVPSGKLLATLLGHTKTVLHCRFSHNGQTLITSSEDATIRVWRWKSGE
CKVLQGHKEQVRCFSLLSTLPVDTRLLSWSFDGTVKMWDLESGEKLQDIQAHRGAILSCH
VSPDGCLFATTSADKTAKLWQCESWQCVHTLSGHQDCVRSCRFSWDSQCLATGDDNGEIR
LWSVKDGSLLRICSRDGKDGMDSLHGGWVTDLHFSPDNSLLVSTGGYVKWWDVEKGEALQ
TFFPTGTALKRIHVSADFSTFVTIDSIGILYILERVV
NT seq 3894 nt   +upstreamnt  +downstreamnt
atggcgttggaggaaggggcacggagctgtctgctgcgctttcgccacagactggagcag
gacataaagccctcctacctgatggaccatatgatcagtgatggtgtgctgactgtgaac
gaggaggagagaatcatgaacaagcccaccaggaaggatcaggctgtggccctgctggag
ctgctacttaggaaggacaaccgtggctacatctccttctacaatgccctgatcacggag
aaatacaatgatttggccaatctgctacatgatgacctaccgcagacgttacccggtgca
tataaaagctcctctgatggctgcacatcttatgtccagacagtgcttagtgaaggtggc
gtaccacagaggcccgtggtgtttgtgagcaggccacagtttgtaaaccgcgtcagggag
aaactctaccggctgcagaaagagcctggctgggtcactgtcttcggcatggctggctcg
ggcaaatccgtcctggcggctgaggctgtcagacaccatggactcatcgaagagtgcttt
cccggagggatccattggctgtccattggccagctggacaaaccagacttaatggtgaag
atccagtcattgtgtttccgtcttgagcagagcctggattccccctccctccaccggccc
cccaactctctggatgaggccaaggagcgcctgcgctacctcaccctgcgcagatatcca
agatccctgctgattctagatgatatctgggacagcacagtactaaaggcgtttgatatc
cactgtcggatacttttgaccaccagaaatagaagcctcgttgactctgttagtggtgcc
aaatatgaggtggaagtggagagtggtctagatgaaaagaagggacttgagattcttgct
ctgtacactaacactaaactccacggacttcctgaggaagctcgcagcatagtcaaagaa
tgcaaaggttcccctctggtggtgtccctgatcggggctctcctcaaagagaaacccaac
cgttggcgttactacctcaaccaactgcagcagaagcagttcaagcgtataaggaagtca
tcgtcttacgactacgacgccctggaccaagccatggatgcgagcattgaagtcctacct
gacgaacatcgagagctctacaaggaccttagcgtgttagagaaggacatcaaagtccct
gcaaaggtgctgtctgttctgtgggacctcgagccggagcaggtggaggacattctcgag
gagtttgtcaacaagtctctgctttttgtggacagtaacaataaaccctacctgtactac
ctccatgacctccagctggacttcctggtggagcagaatcgcacccagctcaagagcctc
cacagtaaggtggtgcatcagtaccagcagcactacagagatggtcctcccacctcagga
gatgaggaatgtctctactggatcagattcctgacccaccacatggccaaagccaacctc
tctcaggagctctactccctcatgttttctctggactgggttagcatcaaggcccagatc
atgggcccagctcacctcatcaatgactatgtggagtatggacccattctggacaaagag
aacagtgaagtgcgcagtcaattccaggagtttctctctctgaacggccaccagctggaa
cagcgtcctttccctgacgtggtgcagcttgctctgtctcagccacaaacctccgaggtc
tacagacaggctctgctgcaagcacagggccgggccagcacggggaaactctactttgac
tggctgaataagagcagcgtagagaatctgtcccgtctggtgatccacccccaccagggc
tccatctactccgcctgcttctcccatgatggagccaagatcgcctccagtggagccagc
aagacactaaaggtgtttaaaagcacctcaggtgagaagctcacagagatccaggcccat
gatgacgaggtgctctgctgtgccttctcccctgacgaccgtctactagcaacctgctcc
agtgacaggaaagtcaaggtgtggaatgtggagcgatccatgctgctgagggtctttgag
gaggagcatgaagagcaggtcaaccactgtcagtttaccaacacgacacaacgcgtcctg
ctggccacctgctccaacgacaagttcttgaatgtcaagctgtggaacctcaacaagcca
tcctcccagaacaccatgtttggccactttgagccagtcaaccactgttgtttctctcct
gatgacacctatttgtccacttcctccaacgacggtaccgtcaagctatttcagctgtcg
tctgccaatgagtggaagacaatcaacgtgagagacatgtttgcagagagtgatgaagag
gtgcttgtcaagtgcagcacctggactgctgatggcaaacacatcatatgtgcggccagg
aacgctgctctggtgtttgatgtggagacatcggacatgttgttggagatcagaacgaat
cgtttgagcacggtgcaatactgtcacgcctgttctaccagtaacttgctggcgatcgca
ttctcaaactacgctgtggagctgtgggacttggaggccaataagaagatggctgactgc
agcggacacctgagctgggtccagcgtgtccagttctctcctgacggctcacagctgctc
tcctgctctgacgaccagactgtcaggttatgggagactaacaaggtgcacacctcctca
gctgtctgcctaaaaagagactcagacgttctcttctatgatgaagaaatcatcgtgtca
gctgcagataactgcaacagactgcaggtgcgtgatggcaggacaggatcagtgctgttc
cagtcggaggagaagtcgtccaggatccggtgtacgtgtatgtgcagacagccctctgct
gtggccctgggccaggaagatggcactgtacagacagcaggactgacagctagaaaggta
ctgaggacacttggctgcaggatccagcgactgttgacctctttcagggggttgattctg
gctgtagggctatgcacaggcagtgtgcaggtattggaggtgccctctgggaagctccta
gccactctgctgggacacaccaagacggtgctgcactgccggttcagccacaatggccaa
acactgatcacatcctccgaggacgccaccataagggtgtggaggtggaagtctggggag
tgtaaagtacttcagggtcacaaggaacaggtccgatgcttctctctgctctccaccttg
cccgtcgacacaagactgctgtcctggtccttcgatggcactgtcaagatgtgggaccta
gaaagtggagagaagctgcaggacatccaggctcatcggggagccatcctgtcctgtcat
gtatcgccagacggatgcctctttgccaccacctctgctgacaagactgctaagttgtgg
caatgtgagtcctggcagtgtgtccacaccctgagcggccaccaagactgtgtccgaagc
tgccgattctcctgggacagccaatgccttgcaacaggagacgacaacggagagattcgg
ctctggagtgtcaaggacggctctttgctgaggatttgttcccgtgacgggaaggacggc
atggattcactccacggaggctgggtgaccgacctgcacttctccccagacaactctctt
ctggtctcgactggcggttacgtcaagtggtgggatgtggagaaaggcgaggccctgcag
accttctttccgaccggaacagcgttgaagaggatccacgtctcagccgacttctctacc
tttgtcaccattgacagcatcggcattctctacatcctggagagggtggtgtga

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