Perca flavescens (yellow perch): 114552649
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Entry
114552649 CDS
T07494
Symbol
tiam1
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04530
Tight junction
pflv04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
114552649 (tiam1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
114552649 (tiam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pflv04990
]
114552649 (tiam1)
Domain-containing proteins not elsewhere classified [BR:
pflv04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
114552649 (tiam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
114552649
NCBI-ProteinID:
XP_028429424
LinkDB
All DBs
Position
3:3606492..3663129
Genome browser
AA seq
1597 aa
AA seq
DB search
MGNVESQNGDHALYGNEHGYLSRKHMSRSLRISNKQSRRSRHASSGKIEHRNSETSTRSS
STPSIPQSLADNGLEPFNETNILPDFGSPIWVDRVAMNLRPVSFHNDLANPSVHMNTMHI
TLPGPTAEEVQDEDVYTGEVTYLQKTRDGSKETVSFKKKRSKSADMWRNDSLEFSLSDLS
QEHLTSTEEIIDTANERDFTDCEGHLQSSPSDSADRANSLDELYSQKIPARRQPHGRYAK
WHDANRAIREGEDDKMLSPSEEDGNTYGAYTLPCRRSHCLSEGLSSHQAAMCASMQGRRA
QTIQDVTAGEGSEYEDSGIDGVTAEAEHQSRRYKTMSASFSVCSAAGRSMFAGSDSGSSS
GGCGGAGECVQGVYENFRQELEMSSCQTESLEEAGSALSDEQSTMSSAYQSDPLLSVAQG
MVRKAGRLAVKNFLVHKKNKKVESATRRKWKGYWVSLKGCTLFFYETDGRSGIDNNSIPK
HAIWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTCSQTELENWITAIHSACAAAIAR
QHHREDTVRLLRAEIKKLEQKIDMDEKMKKMGDMQLSAVTDTKKRKTILDQIFLWEQNLE
QFHMDLFRFRCYLASLQGGELPNPKRLLAVASRPTKLAMGRLGIFSVSSFHALVAARTEN
GVRRRTQAMSRSCSKRKSRFSSLWGLDTTSKKKTKAHPSINQVFADGGEPVKKPVDGIHV
DPAKERTKGEEGCVKSLPRPSTESDIWVPDHLTPSWVCLPNDQPVLTIIQPGESALCVLE
TICKAHQLDPTKHYLRLKFLIENQVQLYIPKPEEDVCDLLYKEIELCSKITKVIQFDRDE
SCMIGYGFSISVVEEDGVQQLYITDVKAGGLAFAKGLNAGDEILQLNGKDSHSLNFSDMK
AAFSQASLALTVNTLPSVDRRQLCYLPPRRSDAEDDLYTDIFSQSQEEILDDGVGLLLES
SGDSLDDDSEIFSQFECRKSTEQVAAFCRSLHDMNPTECVSSSPSPDSPFPPPSTLRQLS
DADKLRKVICELVETERTYVKDLNCLIGRYLTPLQKETFLTQDELDVLFGNLPEMVEFQV
EFLKTLEDGTRLVPDLEKLERVDQFKKILFSLGGSFLYYADRFKIYSAFCASHTKVPKVL
VKAKTDHEFKAFLDDRNPKQQHSSTLESYLIKPIQRVLKYPLLLKELYSLTDPDSEEHYH
LDVAMKAMNKVASHINEMQKIHEEFGAVFDLLITEQSGEKKEVADLSMGDLLLHTSVTWI
NPPASLGKWKKEPQIATFVFKTAVVFVCKDGSKQKKKMGGSHRVSISSEEKDPFRFRHMI
PTDALQVRSLGNADGEGSAVCEIVHIKSESEGRPERTFQLCCSSPESRKDFLKTVHSILR
EKHRRQLLKTESLPLNQQYVPFGGKRLCALKGARPAINRAASAPTRTLGRRKLVRNRFTI
DTDIVFDGEPEQDLASPQEPDSNRLQQDHKPDKPQQSELAGDTDRWVEEQFDLEEYEDPE
EVKETDILSDEDDEFCQTPRALSAEADLEAPVMALSLESEKTDESESLKSPKASGTPDDV
KLSNTEKQSAVIDAKQTEEDEIWVRRQRSGSSPDCGT
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgtcgagagccagaatggggaccatgccctctacggtaacgaacatggctat
ttgtcacgtaagcacatgtctcggtctcttcgcatctccaacaagcagtccagacgctct
cgacatgcttcatcagggaaaatagagcacaggaactctgagacgagcacacgctcaagt
agcacccccagtatcccccaatccctggctgacaatggactggagcctttcaatgagaca
aatatcctcccagacttcggaagcccaatttgggtggaccgtgtggccatgaacctgcgg
cctgtgtcctttcacaatgacctggccaatccgtccgtgcacatgaatacgatgcacata
accctacctggccccactgcagaggaggtgcaggacgaagatgtgtacacaggcgaggta
acctacctccagaaaactcgggacggctccaaggagaccgtcagcttcaagaagaaaagg
tcgaagtctgcagacatgtggcgaaacgacagcctggagttctccctgtctgaccttagc
caggagcacctgaccagcacagaggagatcatcgacacggccaacgagagggacttcact
gactgcgaaggacacctgcagtccagcccctcggactccgccgacagggccaactccctg
gacgagctgtatagccagaagatccccgcccgcaggcaaccccacggccgctatgccaag
tggcacgacgccaacagggctatcagggagggcgaagacgataagatgctctccccgtca
gaggaggatggtaacacctacggtgcatacaccctcccttgccggcgctcccactgcctg
tccgaaggcctgagcagccaccaagccgccatgtgtgccagtatgcagggcaggagggcg
cagactatacaggatgtcacggccggggagggcagcgagtacgaggacagcggcatcgac
ggggtgacggcggaggccgagcaccagtctcgacgctacaagaccatgtcggcctccttc
tccgtgtgctcggcggccggcaggagcatgttcgccggcagcgacagcggcagcagcagc
ggcggctgcggcggggccggcgagtgcgtacagggcgtgtacgagaactttcgccaagaa
ctggaaatgagctcctgccagacggagagcttggaggaggcagggtcggccctgagtgac
gagcagagcactatgagctccgcctaccagtcggacccgttgctcagcgtcgcccagggg
atggtacgcaaagccggcaggctcgccgtcaagaacttcctcgtacataagaagaacaag
aaagtggagtcggccacgaggcgcaagtggaagggttactgggtttccctgaaaggttgc
actctgttcttctatgagactgatggccgttcagggatcgacaacaacagtattcccaag
catgccatctgggtagagaacagtattgtccaggctgtaccagagcatcccaaaaaggac
tttgtgttttgtctcagcaactccctgggagatgcttttctgtttcagacctgcagccag
acagagctggagaactggatcacagccatccactcggcatgtgccgctgccattgcccgc
cagcaccacagagaggacacggtgcgcctgcttcgcgcagagatcaagaagctggagcag
aagatcgacatggacgagaagatgaagaagatgggagacatgcagctgtcggcggttact
gacaccaagaagaggaagacgatcctggatcaaatcttcctgtgggagcagaacctggag
cagtttcacatggatctgttccgcttcaggtgctacctggccagcctgcagggaggagag
ctgcccaaccccaaacgcctcctggctgttgcctctcgccccaccaagcttgcaatgggc
cggctgggtatattctcagtctcttccttccatgcactggtggcagcacgcacagagaac
ggagtgagacggcgaacccaggccatgtctcgttcctgcagcaagcgcaagagcaggttc
tcctccctttggggcctggacactacctcaaagaaaaaaacaaaagcccatcccagtatc
aaccaggtctttgctgatggcggcgagccagtgaaaaagcctgtagatggcatacatgtt
gatcctgccaaggaacgcacaaaaggtgaggaaggatgtgtgaaaagccttccgcggccc
agcacggaaagtgacatctgggtccccgaccacctcaccccctcctgggtgtgtctgcca
aatgaccagccggtgctaaccatcatccagccaggggagtcagcactgtgcgttctggaa
acaatctgcaaggctcaccagctggatcccaccaagcactacttgcgtctcaaattcctt
atcgaaaaccaagtgcaattatacattcccaaaccagaagaggatgtgtgcgacttgctt
tacaaagaaattgagctctgctccaaaattacaaaagtaatccagtttgacagagatgaa
tcctgcatgattggttacggtttctccatttctgtggtggaggaggatggagtacagcag
ctctacatcacggatgtgaaggcgggcggattagccttcgccaaaggtctaaatgcaggg
gatgaaatacttcagctgaacgggaaagactctcacagtctcaacttctccgacatgaag
gcggctttctctcaagcttcgctggctttgacagtcaacaccctgccttctgtggatcgc
cgtcagctctgctacctgccgccacgccgctctgatgcagaggatgatctctacacggac
atcttctcccagagtcaagaggagatcctagacgacggagtgggactgttgctcgagagc
tcaggagacagcctggacgacgactctgagatcttcagccagtttgagtgcagaaagagt
acggagcaggtcgctgctttctgccgcagtctccatgacatgaatcccacagagtgtgtg
tcctcttcgcctagcccagactcgccgttcccacctccctcaactctgcgacagctctcg
gatgccgacaagctccgcaaagtcatctgcgaacttgtggagaccgaacgcacctatgtc
aaagatcttaattgcctcattgggagatatttaaccccactgcaaaaagagaccttcctc
acacaggatgagctggatgtactgtttgggaacttgccggaaatggtggagttccaggtt
gagtttctcaagaccctggaagacgggaccagattggttccagatctagagaaattggag
agagtggatcagttcaagaaaatcctcttctccctgggaggctctttcctgtactatgca
gaccgttttaaaatatacagtgctttctgcgccagccacaccaaagtccctaaggtcctc
gtaaaggccaaaaccgatcatgaattcaaggccttcctggatgaccgcaaccccaagcag
cagcactcttccacccttgagtcctacctgatcaaacccatccagagggtgctgaagtat
cccctgctgctgaaggagctctactcgctcacagacccagacagcgaggagcattaccac
ctggatgttgccatgaaagccatgaacaaagttgccagccacatcaacgaaatgcagaag
atccatgaggaatttggggcagtgttcgatctgctcatcactgagcagagtggtgaaaag
aaagaggtggctgatctgtccatgggtgacctgctactccacaccagtgtgacctggatc
aacccccctgcctctttgggaaaatggaagaaagaaccccagatagctacatttgtgttc
aaaacagcagtggtctttgtatgcaaggatggatccaagcagaagaagaaaatgggtggc
tcccatcgtgtctctatatcttctgaagaaaaagaccccttccgattccgtcacatgatc
ccaactgacgctcttcaagtcagatccttgggcaatgcagatggcgagggctcggctgtg
tgtgaaattgtccacataaagtcggagtcagagggaaggccagagaggacattccagctg
tgctgtagttctccagagagtagaaaggactttctgaagacagtccattccatcttgagg
gaaaagcaccgccggcagctccttaaaacagagagtttacccctcaaccagcagtatgtg
ccttttggaggaaagcgcctctgtgccctgaagggagcccgtcccgccataaatagagca
gcatctgcaccgaccagaactctaggcagaaggaagttagtgcgcaaccgtttcaccata
gacacagacatagtttttgatggcgagcccgaacaggaccttgcttcaccacaggagccc
gactcaaatcggctgcagcaggaccacaaaccagacaagccgcagcagtctgagttagca
ggtgacacagaccgctgggtggaagaacagtttgacctagaagaatacgaggacccggaa
gaggtgaaggagacagacatccttagtgatgaggatgacgagttctgccaaacacccagg
gcactgtccgctgaggctgacctggaggcacccgtcatggctttgtccttggagagtgaa
aaaactgacgagagcgagagccttaagtccccaaaggccagcgggacacccgatgatgtg
aagctgtccaacacagagaagcagagtgccgtgatcgatgcaaagcaaactgaggaggat
gaaatttgggtaagaaggcagcgatccggttcgtccccagactgtggcacataa
DBGET
integrated database retrieval system
