Perca flavescens (yellow perch): 114560007
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Entry
114560007 CDS
T07494
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
114560007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114560007
Enzymes [BR:
pflv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
114560007
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
114560007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Ribosomal_L19e
Motif
Other DBs
NCBI-GeneID:
114560007
NCBI-ProteinID:
XP_028440917
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All DBs
Position
8:30130563..30137372
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AA seq
444 aa
AA seq
DB search
MEDKLNGFPVVSPEYLQQWVQSAQQFQALQAQYSGFNHNHQSHYPEELPGETAMAHMGYP
EPMMDQQEPANLAKPPAKKRGRPAQPKEPKAPKPPKVPKAPKPPKDPNAPKAKPGPKPKK
ATEAQADGKQEKIDESFKKVKRKIDRFKGMSEEEVMTKTLPDLLEYNLDYVIIGINPGLM
AAFIGRWFPGPGNHFWKCLFLSGFTEEQLNHMHDTTLPVKYKMGFTNMVARATPGSKDLS
SKELREGGKILVEKLKKFKPLIAVFNGKCIYEMFCREMFGKKPKKLDFGLQPHKIPDCDV
ALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDELKGLQKSTEIEEVDYRFDLKLAKEDA
KRMAIKEEQYDPGYEDAYGGAYAEGPAQSQTNGHCTFSNVENTEGAQEATTSQMPGQLPD
GQWMTQSFADEIPDISGGAKDGSV
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagctgaatggattccctgttgtctccccggagtatcttcaacagtgggtt
cagtctgcacagcagtttcaagctctccaggcccaatattcaggcttcaaccacaatcat
cagtctcactatccggaggagctgccaggagagacagccatggcacacatgggttatcca
gaacccatgatggatcagcaggaaccagccaacctggcaaaacccccagccaaaaagaga
ggcagaccagctcaacccaaggaacccaaggctcccaaaccaccaaaagtccccaaggca
ccaaagccacctaaggacccaaatgcacctaaagccaaacctggtcctaagcccaagaag
gccactgaggctcaggcagatggcaagcaagagaagattgatgagagcttcaagaaggtt
aagaggaaaattgaccgcttcaagggaatgtcagaggaggaagtcatgacaaaaactcta
ccagacctgctggaatacaacctggactatgtcattattggtattaatccaggactgatg
gcagctttcattggacggtggtttccaggtcctggaaatcatttttggaagtgcctgttt
ctgtctggatttactgaggagcaactcaaccatatgcatgacaccactctgcctgtcaaa
tacaaaatgggcttcaccaacatggtggccagggcaacaccagggagcaaagacctctca
agtaaagagttgcgtgaaggtggcaaaattcttgtagagaagctgaagaaattcaagcct
ctaattgctgtttttaatggcaaatgcatctatgaaatgttctgcagagaaatgtttggt
aaaaaaccaaagaaacttgattttggtttgcagccacacaagatccccgactgtgacgtg
gccctgtatctgatgccttcgtccagtgctcgttgtgctcagttccctcgtgctcaggac
aaagtccacttctacatcaaactgagggagctccgagatgagctaaagggtctccaaaaa
agcactgagatcgaggaggttgactacaggtttgacctgaaattggctaaggaggatgcc
aagaggatggcaataaaggaggagcagtacgatcctggttatgaagatgcctacggtgga
gcatatgcagagggtccagcccaaagccagaccaacggtcactgtacattctcaaatgta
gaaaacacagaaggagcacaggaggcgaccacgtcacaaatgccaggccagctcccagac
ggacagtggatgacccagtcctttgcagacgagatcccagacatcagcggtggagcaaag
gatggcagcgtataa
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