Perca flavescens (yellow perch): 114560430
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Entry
114560430 CDS
T07494
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
114560430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114560430
Enzymes [BR:
pflv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
114560430
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
114560430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AT_hook
TFIIA
Motif
Other DBs
NCBI-GeneID:
114560430
NCBI-ProteinID:
XP_028441599
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All DBs
Position
8:30123192..30129508
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AA seq
428 aa
AA seq
DB search
MLIYSNKSTVKMEENQYTSLTVPTDYFQQWYQSSQQHPEAQYVMPYHNTGHYTEGPRDEL
VMAELSVHREPPVYQEPFYQNYNPPAQNHYQELTYQPNVREQQQQQQQQHPAHLHHPQHQ
HTIQQQEPSVQHQPQPAGPPQAVTPVKKKRGRPPKQQAEEGKTQEEENEIEAAKKAKRAL
NRFNGMSVAEVMAKTLPDVISYNLDILIIGINPGLLSAFKGRHYPNPGNHFWKCLFLSGL
TDEQLNYMHDQSLPEKYSIGFTNMVERTTPGSKDLSSKEIREGGRQLLDKLQKYKPLIAA
FNGKGIYEIFCKETFGVKAKNLDFGLQPYKIPETETVCYLMPSSSPRCAQFPRAQDKVHF
YIKLKELRDQMKGLAPRPEVEETQYLFDLQLAKEDAKRMAIKEEQVDPEYESCSGLHGDV
KQSSNSSN
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgttaatttattcaaataagtcaacagttaagatggaagaaaaccagtatacatcattg
acggttcctacggattattttcagcagtggtaccagtccagccagcagcaccccgaggct
cagtatgtgatgccgtatcacaacacgggccattacacagaaggtcccagagatgagctc
gtcatggccgagttgtctgtccaccgcgaaccacctgtataccaagaacctttttaccag
aactataaccccccggcccaaaatcactaccaggagctgacctaccagccaaacgtcagg
gagcagcagcagcagcagcagcagcagcatcctgcacacctgcaccaccctcagcaccaa
catacaatacagcagcaggagccaagtgttcagcaccaacctcagcctgctggtccacct
caagctgtgacaccggtgaagaagaagagaggccggcctcctaagcagcaggcggaggag
ggcaagacacaggaggaggagaatgagattgaggcggcaaaaaaagccaagagggctctc
aaccgcttcaacggcatgtcagtggctgaggttatggccaaaaccctgccagacgttata
tcctacaatcttgacattttgataattggaattaacccaggactattgtcagccttcaaa
ggacgccattatccaaacccaggaaaccatttctggaaatgtctgtttctttctggtcta
actgacgagcagctcaactacatgcatgaccaaagcctgccggagaaatatagcatcggc
tttaccaacatggtagagaggaccacacctggtagcaaggacctctctagtaaggagatt
cgtgaaggaggtcgacagttacttgacaagctgcagaaatacaaaccattaatagcagct
tttaatggaaaaggtatttatgaaatattctgcaaagaaacctttggtgtgaaggcaaag
aatctcgactttggtctacagccttacaaaatcccagaaactgaaacggtgtgctacttg
atgccgtcatcaagcccccgctgtgcccagtttccccgtgcacaggataaggttcatttc
tacatcaagctgaaggaactgcgagaccagatgaaaggcctggcaccaaggcccgaggtg
gaagagacacagtacttgttcgatctgcagctagctaaagaggatgctaagaggatggca
atcaaagaagagcaggtggatccagagtatgaaagctgtagtgggctgcatggggatgta
aagcaaagcagcaactcctccaactaa
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