Perca flavescens (yellow perch): 114562615
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Entry
114562615 CDS
T07494
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04010
MAPK signaling pathway
pflv04020
Calcium signaling pathway
pflv04510
Focal adhesion
pflv04540
Gap junction
pflv04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114562615 (pdgfrb)
04020 Calcium signaling pathway
114562615 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114562615 (pdgfrb)
04540 Gap junction
114562615 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
114562615 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pflv01001
]
114562615 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pflv04090
]
114562615 (pdgfrb)
Enzymes [BR:
pflv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
114562615 (pdgfrb)
Protein kinases [BR:
pflv01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
114562615 (pdgfrb)
CD molecules [BR:
pflv04090
]
Proteins
114562615 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Adeno_E3_CR1
RIFIN
VEGFR-1-like_Ig-like
C2-set_3
Ig_VEGFR-1-like_5th
PPC
Haspin_kinase
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
114562615
NCBI-ProteinID:
XP_028444926
LinkDB
All DBs
Position
10:20391930..20418904
Genome browser
AA seq
1130 aa
AA seq
DB search
MFVLQITASCTLHRGKHHSEQRALKASTMRRVTASTLHLTVTVTALLYFCTELCCLEITP
DDKELVLAEGSSLILTCSGSGNTTWEFKRDDVPYFQVEVQNGGLSYQIVQSSVTSSVLTL
WNVSWKHTGVYQCVDQHTGETKEVAVFVPDPDVWFIESSHGMVTKTSEETTVPCVVTNPN
IKVTLYEKDTDLPIRGLYVPSEGYKARLEDRTYVCRGELNEEVKESQAFYVFSIVVPEAI
DAYINASKTVLKQGEPLTVNCTVHGVELVYFSWDIPNREVGAVKPLTDVLSATSMRSCLI
FPRATVAHSGNYVCHVHEHVQDQTASASVNITVLEQGFVDVKAAQQQNISAKLQENVELR
VEIEAYPPPQVRWSKDGATLKRDKTITTRQEHEIRYVTTLTLVRVRTEQKGLYTVLVTNG
DDTREVTFDLEVQVPSQIKELTDHHLPGKRHLVTCVAEGVPTPTIQWYSCDSMHKCSNQT
AAWQPLIPEPEVLTIRNNVSYIETRKTSQVLSQVTFYKPQQVTVRCETSNQAGLLDRRDV
KLVSSTLYSQVAVLAAVLALVVIIIISIIILIAVWRKKPRYEIRWKVIESVSQDGHEYIY
VDPIHLPYDLAWEMQRDNLVLGRTLGSGAFGRVVEATAYGLTHSQSSTKVAVKMLKSTAR
RSETQALMSELKIMSHLGPHLNIVNLLGACTKNGPLYLVTEYCRYGDLVDYLHRNKHTLL
QYYAEKNQDDGCLISGGSTPLSQRKGYVSFGSESDGGYMDMSKDEPTIYVPMQEQMDSIK
YADIQPSPYESPYQQDIYQEQGGGGLDLTISDSSVLTYDDLLGFSYQVAKGMEFLASKNC
VHRDLAARNVLICEGKLVKICDFGLARDIMHDSNYISKGSTFLPLKWMAPESIFHNLYTT
LSDVWSYGILLWEIFTLGGTPYPDLPMNELFYSALKRGYRMAKPAHASDEVYDIMKKCWD
EKFEKRPDFSFLVHSVGNMLTDSYKKQYSQVNDNFLKSDHPAVARTKPRLSSPFPIANPA
FGSPSPLYMPPDPYSQSPSPAEFRQEADTQEVMTSYNEYIIPIPDPKPEDVFTDVPSESP
ASSLALEEETDSMSQDTADTLPEEDRLEETSERDALLGITGTPEVEDSFL
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttttgcagatcacagcttcctgtacacttcatcggggtaaacatcattcagaa
caaagggcattgaaggcttccaccatgaggagggtgacggcatccacgctccatctgaca
gtcacggttacagctcttctgtatttctgcaccgagctctgctgtctggagatcacaccc
gatgacaaagagctggtcctggctgagggctcctcgctcatcctcacctgctccggctca
gggaacacgacgtgggagttcaagagggacgatgtgccgtacttccaagtggaagttcaa
aatggtggtctaagctaccaaattgtgcaaagtagcgtcacatccagtgttttgaccttg
tggaacgtgagctggaagcacacgggggtgtatcagtgcgttgatcaacacaccggagaa
actaaggaggtggctgtttttgtcccagaccctgatgtgtggttcatagagagctcccac
ggcatggtaacaaagaccagcgaggagaccaccgtcccctgtgtggtcaccaacccgaac
atcaaagtcaccctgtatgagaaggacactgatctgcccatcaggggactttatgttcca
agtgaggggtacaaggcacggctggaggacaggacctatgtgtgccggggagagctgaac
gaggaggtgaaagagtctcaggccttctacgtcttcagcattgtcgtcccagaggccatc
gacgcctacatcaatgcgtcaaagaccgtcctgaagcagggcgaaccgctgacagtaaac
tgcacagtgcacggagtggagctcgtgtatttttcctgggatatccccaacagagaggtt
ggagcggttaagccgctgacagacgtcctgtccgccacgagcatgcgatcctgcctgatc
ttccctcgtgccacggtggcccacagcggaaactacgtctgccatgtccacgagcatgtc
caagaccagactgcctcggcaagcgtcaacatcaccgtgctcgagcaaggcttcgtggat
gtgaaggctgctcagcaacaaaatatttcagccaagctgcaagagaacgtggagctgaga
gtggagattgaagcctaccccccccctcaggtccgctggagcaaagatggcgccaccctc
aaaagagacaaaaccatcacaaccagacaagagcatgagatcaggtatgtcactactctc
accttggtgagggtaaggacggagcagaagggtctctacaccgtccttgtcactaacgga
gatgacacaagggaagtaacctttgacctggaggtccaagttccttctcagattaaagaa
ctgactgaccaccacctccctgggaagagacacttggtgacctgtgtagctgagggggtc
ccaaccccaaccatccagtggtacagctgtgacagcatgcacaagtgtagcaaccagaca
gcggcgtggcagccgctgataccagagccggaggtgctgaccatccgcaacaatgtcagc
tacatagagactcgtaaaaccagccaggtgctgagccaggtgaccttctacaagccccag
caggtcacagtgcgatgtgagaccagcaaccaagcaggactcctcgacagaagagacgtc
aaactggtgtccagcacactgtactcccaggtggcagtattggctgccgttttagcctta
gtggtcatcattatcatatctatcatcatcctcattgctgtatggaggaagaaacctcga
tatgagatcagatggaaggtgatagagtctgtgagccaggatggtcatgagtacatctat
gtggaccccatccacctgccctatgacctggcctgggaaatgcagcgagacaacctggtg
ctgggtcgcactcttggatcaggagcctttggcagggtggtcgaggcaactgcctatggt
ctcactcattcccagtccagcacaaaagtggccgtgaaaatgctgaaatctacagccagg
agaagtgagactcaggctctgatgtcagagttgaagatcatgagtcacctgggccctcac
ctcaacatcgtaaacttgcttggagcttgcaccaaaaatggccctctgtacctggtgaca
gagtactgtcgctatggcgacctggtggactacctgcacaggaacaagcacaccctcctg
cagtactacgctgagaagaaccaagacgacggctgcctcatctctggaggaagcactccg
ctcagccagagaaaaggctatgtgtccttcggaagtgagagtgatggaggatacatggac
atgagtaaagatgagcccaccatctacgtgcccatgcaggagcagatggacagcatcaag
tatgcagacatccaaccatctccatatgagtctccctaccagcaggacatctatcaggaa
caaggtggcggcggattggacctgaccatcagtgactcttccgttctcacctatgacgat
ctgttgggcttcagctaccaagtggctaaggggatggagttccttgcctcaaagaattgc
gtccatcgggacctcgctgccaggaatgtgttgatctgtgaggggaaactggtgaagatc
tgtgactttggcctggccagagacatcatgcatgattccaactacatctctaaaggcagc
acttttctgcccctgaagtggatggcaccagaaagtattttccataatttgtacaccacc
ctgagtgacgtgtggtcatacggcattcttctttgggagatctttacattgggaggaacc
ccctatcctgatttgcccatgaatgagttgttctacagtgctttgaagagaggctaccga
atggccaaacctgcccacgcctctgatgaagtttatgacatcatgaagaagtgctgggac
gagaagtttgagaaaaggcctgatttctcatttctggtccacagtgtggggaatatgttg
acagacagctataaaaagcaatacagccaagtcaatgacaacttcctgaagagtgaccac
ccggcagtcgcccgcaccaaacccagactctcctcaccctttccgatcgccaacccagca
ttcggctccccatcccccctctacatgcccccggacccatacagccagagcccgagcccc
gcagagttcagacaagaggcagacacacaggaagtcatgacttcatacaatgaatacatc
attcccatcccagaccccaagccggaggatgttttcactgacgtgccatcagaaagccct
gcaagctctctggctctggaggaggagaccgactccatgtcgcaggacactgctgacact
ctcccagaagaggacaggctagaggagaccagcgagagagacgctctgctgggcatcacc
gggacgcccgaggtagaagacagcttcttgtag
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