KEGG   Perca flavescens (yellow perch): 114564534
Entry
114564534         CDS       T07494                                 
Symbol
kdm6a
Name
(RefSeq) lysine-specific demethylase 6A isoform X1
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
pflv  Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pflv03036]
    114564534 (kdm6a)
Enzymes [BR:pflv01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     114564534 (kdm6a)
Chromosome and associated proteins [BR:pflv03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     114564534 (kdm6a)
   Histone demethylases
    114564534 (kdm6a)
SSDB
Motif
Pfam: KDM6_C-hel TPR_1 JmjC KDM6_GATAL TPR_2 TPR_8 TPR_17 TPR_12 TPR_16 TPR_19 TPR_11 TPR_9 TPR_7 TPR_CcmH_CycH ARM_TT21_C ANAPC3 RPN7
Other DBs
NCBI-GeneID: 114564534
NCBI-ProteinID: XP_028447736
LinkDB
Position
11:7217003..7277921
AA seq 1472 aa
MKSCGVSLTAAASAAARSLGVAAGNDEEKMASGTATDIEEDFPKLTAQEKESLVGSDSSL
FGFHRLQEDGARTKALLLKAVRCYDALILKAEGKVDPDIFCQLGHFNLLLEDYTKALSAY
QRYFSLQSDYWKNAAFLYGLGMVYFHYNAFQWAIKAFQEVLYIDPGFSRSKEIHLRLGLM
FKANTDYESSLKHFQLALIDSNLCTLSKAEIQFHIAHLYEIQKKHRAAKEAYESLLQTEN
LPAQVKATTLQQLGWMHHTVEQLGDKGTKDSYAIQCLQKSLEADPNSGQSWYFLGRCYSS
IGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHSHAAAWM
DLGTLYESCGQPHDAIKCYINATRSKACLNTAALTQRIKLLQAQLCNLQPDSLQNKSKML
PSIEEAWSLPIPAELTSRQGALNTAQAQQACKGEGGQSASNHTDPQASPAKRKRTASPAK
GVADSLANRSNQQQIPSWYLTPQKLQHLDLLRTNRANLKPPQVQMLEQLENQFSLMQQHQ
QQQQMRQQAAASGQPRPSLPNGPLAESPHHHAGLSRASPLNHTAIRPPCVPQPTANGSCS
SSPSAGPLGHLDKNHTLGLGGGGASNGNVPYPQQNSLPHNCTAASHPSTSSTTSSPSHAD
ETWRSQQRNTTTQGLQKGPGSHSAGPNGEPPCSSSSSSPQTSFSSSGLLNQVGHSSGPCT
VSSSASSLSPTSPQTTPNHLSSPPHAATTSGLHTKDATPSGGNTGSNAAAAATFPSGPEA
AVRHSTGTPRSPGTAPAQGLTNHVQPRGTDGSPAPGVLSSDNPQLSALLKGKANTTSNDD
NNNSSNHGGPSSEKINNVHPGLHGAAKPTSEQPVASSPRLAAATPSPRSAHPHTANSLSC
LNSPSTTNNQGPTVNGKGPEDSQSPLKAEPSGGAQRHGVPAGLAPWSSVSIYPSSSEVLK
ACRNLGKNGLSTSSILLDKCPPPRPPRPPSPPLPKDKLNPPTPSIYLENKRDAFFPPLHQ
FCTNPSNPVTVIRGLAGALKLDLGLFSTKTLVEANPDHLVEVRTQLAQPTDENWDPSGSR
KMWRCESSRSHTTVIKYAQYQASSFQESLREENEKKKEVETEAGSSDSAMRRRKGSFKHL
KFGTNIDLSDEKKWKQQLQELSKLPAFARVVSAGNLLSHVGHTILGMNTVQLYMKVPGSR
TPGHQENNNFCSVNINIGPGDCEWFAVPETYWGVINDFCEMNNINFLMGSWWPNLEDLYE
TNVPVYRFIQRPGDLVWLNTGTIHWVQAIGWCNNIAWNVGPLTAHQYKLAVERYEWNKLQ
SVKSIVPMIHLSWNMARNIKVSDHRLFEMIKYCLLRTLKQCQMQRELLLAAGKDLVWHGR
TQSEPAHYCSICEVEVFDLLFVTTESNSRKTYVVHCQDCARRGSADLDNFVVLEQYKIED
LMHVYDQFTLVSNGCTGPVPSRADPFKHRGDL
NT seq 4419 nt   +upstreamnt  +downstreamnt
atgaaatcgtgcggagtgtcgctcaccgccgctgcatctgctgctgcccggagcctcggc
gttgctgctggtaatgacgaggagaaaatggcgtcgggaacagcgaccgatatcgaagag
gactttccgaagctaacagcgcaagaaaaagagagcttggtcggatctgacagttcactg
tttggatttcacaggcttcaagaagatggcgccagaacgaaggccttgctgttaaaggct
gttcgctgctatgatgccctcatcctgaaagcagaggggaaagtggaccctgacattttc
tgtcagctgggccacttcaacctcctgctggaggactatacaaaagcattatctgcatac
cagaggtacttcagtttacagtcggactactggaagaatgctgcctttttatatggcctt
ggcatggtatacttccattacaacgcatttcagtgggcaatcaaggcgttccaggaggtg
ctttacatcgaccccggcttctcgagaagtaaagagattcacctgagactgggactcatg
tttaaagccaacacagactacgagtcaagcctaaagcattttcagctggctttgatcgac
tccaatctctgcactttgtccaaagctgaaattcagttccacattgctcatttgtatgag
atccagaagaagcacagagcggcgaaagaagcgtatgaaagtctgttgcagacggagaat
ctccctgcgcaggtgaaggcgaccacactgcaacaacttggctggatgcatcacacggtg
gagcagctgggggataaaggcaccaaggacagctatgccatccagtgtctgcagaagtct
ttagaagcagacccaaactctggccagtcgtggtactttctcggcaggtgctactccagt
attgggaaggtgcaggatgccttcatctcttaccgtcagtccattgataagtcggaggcc
agtgctgacacctggtgctccataggggtgctctaccagcagcagaaccagcctatggat
gcactgcaggcctacatctgcgctgttcaactggaccacagccacgcagccgcctggatg
gacctgggcaccctctacgaatcctgcggccagccgcacgacgccatcaagtgctacatc
aacgctacgcgcagcaaggcctgcctcaacactgctgcactcacgcaacgcattaagctg
ctgcaggctcagttgtgtaacctacagccagatagtctgcagaataagagtaaaatgctt
cctagtattgaggaggcgtggagcctccccattcctgctgagctcacgtccaggcagggg
gccttgaacactgcacaggcacagcaggcctgtaagggggagggaggccagtcggccagc
aatcacacagacccacaggccagtcctgccaagaggaaacgcactgccagcccagctaag
ggtgttgcagactcgttggcaaaccgctccaatcaacagcagatccccagctggtaccta
acgccccagaagcttcagcatctggatctcttgcggaccaaccgagcaaacctcaagccc
ccccaggtgcagatgctggagcagctggagaaccagttctccctcatgcagcaacatcag
cagcagcagcagatgaggcagcaggcagcagcgagtggccagccgcggcccagccttccc
aacggtcctttggctgagtcccctcaccaccacgcaggcctctcccgcgcctcccccctc
aatcacacagccatccggcccccgtgtgtcccccagcccacagccaacggatcctgttct
tcaagtccttcagccgggccgctgggacacctggacaaaaaccacacgctgggactggga
ggtggcggcgcgagcaacggaaacgtgccttacccgcagcagaactctctacctcacaac
tgcacagccgccagtcacccaagcaccagcagcactactagtagtcccagtcacgccgac
gagacatggaggagccaacaacgcaacactaccactcaggggcttcaaaaaggtccaggt
tcccattcggcaggtcccaatggagaacccccttgctcttcctcgtcctcctcccctcag
acctcgttctcttcctctggccttctgaatcaggtcggacattcctctgggccctgcacg
gtctcctcctcagcctcctctctgtcccccacctccccccagaccacgcccaaccacttg
tcctcgcccccccacgccgctactacctcagggctccacaccaaagacgccacgccttca
gggggcaacaccggcagcaacgccgctgcagccgccactttcccatcaggtccggaggcc
gccgtcaggcattccacggggacgccccgaagtcccggcaccgcccccgcacagggactg
actaatcacgtccagccgcgggggacggatggctctcccgcccccggcgtgctcagttcg
gacaatcctcagctctcagccttgctaaagggaaaagccaataccaccagtaacgacgac
aacaataactccagtaaccacggagggccttcctcggagaaaatcaacaacgtccacccg
ggtctccacggtgccgccaagccaacgtcggagcagccggtggcctcctcgccgcgttta
gccgctgccactccctcgccgcgctcggcgcaccctcacaccgccaacagcctctcctgc
cttaacagcccgtccacgaccaacaaccaggggcccaccgtcaacgggaaggggcccgag
gactcccagagcccactgaaggcggagccttccggaggagctcagagacacggcgtccct
gctggtctggcgccctggtcctcggtctccatctaccccagctccagcgaggtgctcaaa
gcatgcaggaacctggggaagaacggcctgtcgacgagcagcatcctcctggacaagtgt
cccccgccacggcccccccgcccgccctctcctccgctgccaaaggacaaactcaatccc
ccaacacccagtatttatctagaaaacaagagggacgccttcttccctcccctccaccag
ttctgcaccaacccttccaacccggtcaccgtcatccgagggctggctggagcgctcaaa
ctagatctgggcctgttctccacgaagacgttggtggaggccaacccggaccatctggtg
gaggtgcggacccagctggctcagcccaccgacgagaactgggaccccagcggcagcagg
aagatgtggcgctgcgagagcagtcgctcccacaccactgtcatcaaatacgcccagtac
caggcctcgtccttccaggagtctctgcgggaggagaatgagaagaagaaggaggtggaa
acagaagcaggttcctcagatagtgcgatgcggcgaaggaaagggtctttcaaacaccta
aagtttggcacgaacatcgacctctctgatgaaaagaagtggaaacagcagcttcaggag
ttgtccaaactgccggcgtttgcccgcgtggtgtcagccggtaacctgctcagccacgta
ggacacaccatcctgggcatgaacacggtccagctctacatgaaggtgccaggcagccgc
acaccaggtcaccaagagaacaacaatttctgttccgtcaacatcaacatcggtcccggg
gactgcgagtggttcgccgtgccggaaacgtactggggcgtcatcaacgacttctgtgaa
atgaacaacatcaacttcctgatgggctcctggtggcccaacctggaggacctgtacgag
accaacgtgcccgtttaccggttcatccagcgtcccggggacctggtgtggctcaacaca
ggcaccatccactgggtgcaggccatcggctggtgcaacaacattgcgtggaacgtcggg
cccctcacagcacatcagtataagctggcggtggagcgctacgagtggaacaagctgcag
agtgtcaaatccatcgttcccatgatccacctctcctggaacatggccaggaacatcaaa
gtgtcggaccacaggctctttgagatgatcaagtactgtttgttacggactctgaagcag
tgtcagatgcagcgggagctgctgctggctgctgggaaagacctggtgtggcacgggagg
acccagagcgagccggcacattactgcagcatctgtgaggtggaggtgttcgacctgctg
tttgtcaccacggagagcaacagcaggaagacgtacgtggtgcactgccaggactgcgcc
cgtcgggggagtgccgacctggacaactttgtggtgctggagcagtacaagatcgaggac
ctcatgcacgtttatgaccagttcacactcgtaagtaacggctgcaccggtcccgttccg
agccgagcggatccgtttaaacacagaggagacctgtga

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