Perca flavescens (yellow perch): 114566054
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Entry
114566054 CDS
T07494
Symbol
dhx9
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pflv03041
]
114566054 (dhx9)
03012 Translation factors [BR:
pflv03012
]
114566054 (dhx9)
Enzymes [BR:
pflv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
114566054 (dhx9)
5.6.2.6 RNA 3'-5' helicase
114566054 (dhx9)
Spliceosome [BR:
pflv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114566054 (dhx9)
Translation factors [BR:
pflv03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114566054 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
AAA_19
nSTAND3
RHA1_ro05818_N
ATPase
AAA_14
Motif
Other DBs
NCBI-GeneID:
114566054
NCBI-ProteinID:
XP_028450192
LinkDB
All DBs
Position
12:34851378..34895078
Genome browser
AA seq
1294 aa
AA seq
DB search
MADVKNFLYAWLGKKKLTPSYDIRAAGNKNRQKFLCEVRVDSYNYIGMGNSTNKKDAQTN
AARDFVSYLVRTGEMSAAEVPAVGVSAPGGDQPDGGNGGGNGGGNGGFGCLPSSGPLPPH
LLVKTEPEEGGGPVPGVTGLGYSGGGGGRGGGGGGGNSGGGGGGEEAQWERGANLKEYYA
RRDEQEAQDTLESEEVDLNANLHGNWTLENAKARLNQFFQKEKTSAEYKYSQVGPDHNRS
FIAEMQLFVRQLGRRITAREHGSNKKLAAQSCALSLVRQLYHLGVLEAFSGVTKKKEGET
LEPFDVSVSADLQQQLAAVVQELGVHIPPPPTDPSCKVSLVQGKMATFEPSQRQSGAGVV
PWSPPQVNWNPWTSSNIDEGPLAFCTPEQISGELHDELMHQLEHDENLQKILGEREQLPV
KQFEEEIMAAVENNAVVIIRGATGCGKTTQVPQYILDSFIRRGKASDCNIVVTQPRRISA
VSVAERVAYERAEDIGKSCGYSVRFESILPRPHASVLFCTVGVLLRKLEAGIRGISHVIV
DEIHERDINTDFLMVVLRDVIQAYPEVRVILMSATIDTTMFKEYFFNAPIIEVFGRTFSV
QEYFLEDSIQMTNFVPPPMDRKRKDKDEEGGGGEDDTNCNQICGPDYSAETKRSMAQISE
KETSFELVEALLRYIETLQVAGAVLIFLPGWNLIYSMQRHLETNPHFGSNRYRILPLHSQ
IPREEQRMVFEPVPDNIRKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYA
TVWASKTNLEQRKGRAGRVRAGFCFHLCSRARFEKLETHMTPEIFRTPLHEVALSIKLLR
LGAIGHFLSKAIEPPPLDAVIEAEHTLRELDALDTNDELTPLGRILAKLPIEPRLGKMMI
MGCIFHVGDAMCTISAASCFPEPFISEGKRLGFVHRNFSGSRYSDHVALLSVFQAWDDVR
ISGEDAEIRFCEHKRLNMSTLRMTWEAKVQLKEILVNSGFPEECLLTQMFNTVGPDNSLD
VVVSLLTYGSYPNVCFHKEKRKILTTEGRNALIHKSSVNCPFSSHDMTYPSPFFVFSEKI
RTRAISAKGMTLVSPLQLLLFACKKINSDGEIVELDDWIKLRIPHEVAGGIAALRAGLEA
LVVEVTKDPEYIRQMDPTNQQLLNLIRLTSKPSAAGLNLMANTQRMGDGPRPPKMARMDG
GSSGGYRGGGGGGGGGGGGRYRGGGGYGGGGYRGGGGYRGGGGYGGGGYRGGGGYRGGGG
YGGGGGGYRGGGGYGGXGGGGYRGGGGGGYRGGY
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtcaagaacttcctgtatgcctggcttgggaaaaagaagctgactcccagc
tatgacatccgagctgcagggaacaaaaacaggcagaagtttttgtgcgaggtccgtgtt
gacagctacaactacatcgggatggggaactccaccaacaagaaggacgctcagacaaac
gccgccagagacttcgtcagctacctggtccgaaccggggaaatgagcgccgccgaagtc
ccggccgttggggtgagcgctccaggcggcgaccaacctgacggaggaaacgggggagga
aacggaggaggaaacggaggctttggatgcctcccttccagcggtcccctgccacctcac
cttttagtcaaaactgaaccagaagagggcggtgggccggtaccgggagtcactggactg
ggctactccggaggaggaggaggaagaggaggaggaggaggaggaggaaactctggagga
ggaggaggaggagaagaagctcagtgggagcgaggagccaacctgaaggagtactacgcc
cggcgagatgaacaggaagcccaggatactctggagtcagaggaggtggacctgaacgct
aatctccatggcaactggacgctggagaacgccaaggcgcgtctgaaccagttcttccag
aaggagaaaaccagcgccgagtacaaatacagccaagtgggaccggatcacaacagaagc
ttcatagcggagatgcagctgtttgtcagacagctcggcagaaggatcacagctcgagag
cacggctccaacaagaagctggcggctcagtcgtgtgctctgtctctggtccggcagctg
taccacctgggggtcctggaggcgttctccggggtcaccaagaagaaggagggagaaacg
ctggagccgtttgacgtcagtgtgtctgcagacctgcagcagcagctggccgctgtagtc
caggaactcggagtccacatccccccaccgcctacagacccctcctgcaaagtgtctctg
gttcagggcaagatggcaacgtttgagccgtcccagcgccagagcggagcaggggtcgtc
ccgtggtctcctccccaagtcaactggaacccctggaccagcagcaacatcgacgaggga
ccgctggccttctgcacgccggagcagatcagtggcgagctgcacgacgagctgatgcac
cagctggaacatgacgaaaacctgcagaagatcctgggggagcgcgagcagctgccagtc
aaacagtttgaggaggagatcatggccgccgtggagaacaacgccgtagtgatcatcaga
ggagccacgggctgcgggaaaaccacccaggtccctcagtacatcctggacagcttcatc
aggagaggcaaagcctctgactgcaacatcgtggtcacccagcccagaaggatcagtgcc
gtgtcggtggccgagcgagtcgcctacgagagagccgaggacatcgggaagagctgcggc
tacagcgtccgctttgagtccatcctccctcggccgcacgccagtgtcctcttctgcacc
gtcggcgtcttgctgcggaagcttgaagcaggaatccgaggcatcagtcacgttatcgtt
gatgagatccacgagagagacatcaacacggacttcctgatggtggtcctccgagacgtg
atccaggcttacccggaggtccgcgtcatcctcatgtcggccaccatcgacaccaccatg
tttaaagaatacttcttcaacgctcccatcatcgaggtgttcggacgcaccttctctgtc
caagagtatttcctggaggattccatccagatgaccaacttcgtccctccgccgatggac
cgcaagaggaaggataaagacgaggaaggaggaggaggagaggatgatacgaactgtaat
cagatctgcgggccggactactcggcggagacgaagcgttcgatggctcagatcagcgag
aaggagacgtccttcgagctggtggaggctctgctgcggtacatcgagacgctgcaggta
gccggcgccgttctgatcttcctgcccggctggaacctcatctactccatgcagagacac
ctggagaccaacccgcactttggaagtaaccggtaccgaatcctgccgctgcactcacag
atcccccgagaggagcagaggatggtgtttgaaccggttcccgacaacatcaggaaggta
attctgtccaccaacattgcagagacgagcatcaccatcaacgacgtcgtctacgtcatc
gactcctgcaagcagaaggtgaagctcttcacctcccacaacaacatgaccaactacgcc
accgtctgggcctccaaaaccaacctggagcagaggaaaggccgagccggccgagtgcga
gccggattctgcttccacctctgcagccgcgctcgtttcgagaagctggagactcacatg
actccagagatcttcaggacgccgctgcatgaagtcgctcttagcatcaaactgctgaga
ctcggcgccatcggacacttcctgtccaaggccatcgagccgccgccgctggacgccgtc
atcgaggccgaacacactctgagagagctggatgccctggacactaacgatgagctgacc
cctctggggaggattctggctaagctgcccatcgagcctcgactggggaagatgatgatc
atgggctgcatcttccatgttggagatgccatgtgcaccatctcagcagcctcctgtttc
cccgagcctttcatcagcgagggcaaacgtctcggcttcgtgcacaggaacttctccggc
agccgctactcggaccacgtggctctgctgtccgtcttccaggcctgggacgacgtcagg
ataagcggcgaggacgcagaaattcgtttctgtgaacacaagcgtctcaacatgtcgact
ctgaggatgacctgggaggccaaagtccagctgaaggagatcctggtcaactctggattc
cctgaagagtgtctgctgactcagatgttcaacacggtcggaccggacaacagcctggac
gtggtggtttctctgctgacctacggctcgtaccccaacgtgtgcttccacaaagagaag
aggaagatcctaaccaccgaggggcgcaacgccctcatccacaagtcctccgtcaactgc
cccttcagtagccacgacatgacctacccctcgcccttcttcgtcttcagcgagaagatt
cggacccgagcgatctcggctaaagggatgactctggtcagtcctctgcagctgctgctg
ttcgcctgcaagaagatcaactctgacggagaaatcgtggagctcgacgactggatcaaa
ctgcggattcctcacgaggtggcgggcggcatcgcagccctgcgggccggactggaggcg
ctggtggtggaagtgaccaaagacccagaatacatccgacagatggacccgaccaatcag
cagctgctgaacctcatcagactcacatccaaaccttcagctgctggactcaacctgatg
gccaacacccagaggatgggagatggtccacgacctccgaagatggcacgcatggatgga
ggcagcagcgggggctaccgaggaggaggaggaggaggaggaggaggaggaggggggcgg
tacagaggaggagggggatatgggggaggagggtacagagggggaggtgggtacagggga
ggagggggatatgggggaggaggttatagaggaggtggtggttacagaggaggaggaggg
tatggaggaggggggggaggctacagaggaggaggagggtatggagganggggtggagga
ggctacagagggggagggggaggagggtacaggggaggttattaa
DBGET
integrated database retrieval system
