Perca flavescens (yellow perch): 114566227
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Entry
114566227 CDS
T07494
Name
(RefSeq) short transient receptor potential channel 3-like isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pflv04040
]
114566227
Ion channels [BR:
pflv04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114566227
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank_4
Ank
Motif
Other DBs
NCBI-GeneID:
114566227
NCBI-ProteinID:
XP_028450350
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Position
13:complement(16006917..16019864)
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AA seq
896 aa
AA seq
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MNNRPPVVHHNSRPAGYTDSPRVRSRDNLLMYDDFGEENCCSGRFLSSHSSSERQLMAPL
SAVKRRQALRGPAYMFSAPSISPSEVEQRFLEAAEYGNIPELRRMLLHVSDLNVNAVDYM
GQNALQLAVANEHLEVTELLLGRADLARVGDALLLAISKGYVRITEALLCHPAFRDAHRL
TASPAQAEMLDDFYAYDEDGTRFSHDVTPVILAAHCQEYEIVHTLLSKGARIDPPHDYFC
GCDSCNYQQQFDSFSHSRSRINAYRGLASPAYLSLSNEDPVLAALELSNELAMLANIEKE
FKNDYCCLSSQCKNYVVGLLDLCRSTEEVDAILSGETDSEDSYDLPGRPSLTRLKLAIKY
ELKKFVAHPNCQQQLLSIWYENMPGLRQQTTAVKLLVVLAVAIGLPGLAVAYWIAPCSRM
GKVMRSPFMKFVAHASSFTIFLGLLILNAADRFAGTILLPNMTHHHLPEGVNLNSDPLLL
YRITTTPFTWMEIFIISWVIGMIWAEVKEIWSLGPGEYLVEPWNFLDFGMLAIFLASFSC
RFSILRHADLAQTYVHTHYTTLINVTLPPEIHYFTLARIYWLPSDPQLVSEGLYAVAVVL
SFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFILVFLAFMIGMFNLYSHYLGAKQN
DAFTTLEESFKTLFWAIFGLSEVKSVVINNGHKFIENIGYVLYGVYNVTMVIVLLNMLIA
MINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSMLGLATAIKSLLL
QYVARHSEEKTETQLNQLGVGKNSGFGASISSSRYQMIMKRLIKRYIIKAQADKESDEIT
EGELKEIKQDISSLRYELLEEKSQNLETLDGLLRRLGEITTPSAASVALPVAPTYI
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacagaccgccagtagttcatcacaacagccgacctgcaggttataccgacagc
cccagggttcggagccgtgataaccttctgatgtacgatgactttggagaggaaaactgt
tgctctggacgattcctcagcagccacagcagctctgagagacagctcatggctcctctc
agtgctgttaaacgacgccaggctcttcgtggtccagcctacatgttctctgctccctca
atcagcccgtcagaggtcgagcagcgtttcctggaggcagctgaatacggcaacatacca
gagttgcggcgcatgctgctccatgtgtccgacttgaacgtcaacgctgtggactacatg
ggccagaatgcattgcagctggctgtagccaacgaacatctggaggtgacggaactgctg
ctggggagggcagatttggccagagtgggtgacgccctccttttagccatcagtaaaggt
tatgtccgtatcacagaggccctcttatgccacccggcgtttagagatgcccatcgtctg
acagcgagccctgctcaagccgaaatgttagatgacttttatgcttatgatgaggatggg
acaaggttctctcacgacgttactcccgtaatccttgcagcgcactgccaggagtacgag
atagttcacaccctcctgagtaaaggagctcgcatcgatcctcctcatgattacttctgt
ggctgtgactcctgtaactaccagcagcagtttgattccttcagccactcgcgatcaagg
atcaatgcctacagaggactcgctagtcctgcttacctctccctgtccaatgaggaccca
gtgctggctgccctggagcttagcaatgagctggccatgctggctaatattgagaaggaa
tttaagaacgactactgctgtctgtcgagccagtgtaagaactatgtggtgggccttctg
gatctgtgtcgcagcacggaggaggtggatgccatactgagcggagaaactgactctgaa
gacagctatgatctaccaggtcgcccctccctcacacggctcaaattagccatcaaatac
gaactcaaaaagtttgtggctcatccaaactgccagcagcagctgctgagtatctggtat
gagaatatgcccggcctgagacaacaaaccactgctgtcaaactgctggtggtgctggcg
gtggctataggactgcctggactggctgtggcctactggattgctccgtgcagcagaatg
gggaaagtgatgcgtagccccttcatgaagtttgtcgctcatgcctcgtccttcacaatt
tttctgggtcttttgatcctgaatgctgccgaccgtttcgcaggcaccatccttttgcca
aacatgacccaccatcatctcccagaaggcgtcaacctaaactctgacccgttgctgctc
taccgcataaccacgacaccattcacatggatggagatcttcatcatttcatgggtcata
ggtatgatctgggctgaggtgaaggagatctggagtctagggcctggggagtacctggtg
gaaccgtggaatttcctggactttgggatgctggcgatcttcctcgcctccttcagctgc
cgcttctccattctaagacatgctgacttagcccagacctatgttcacacacactacaca
acactgattaatgtcacacttcctcctgagatacactacttcacactggcacgaatctac
tggttgccgtcagatccccagctagtatcggagggcctctacgcggtggcagtggtgctg
agcttctctcggattgcgtacatcctcccagccaatgaaagcttcggtccactgcagatc
tctctagggaggactgtcaaggacatcttcaagttcatggtcatctttatcttggtcttt
ctggcgttcatgatcggcatgttcaacctgtactctcattacctgggggcgaagcagaat
gacgcattcaccaccctggaggagagcttcaagacgttgttctgggctatatttggactg
tctgaggtcaagtctgtcgtgatcaataatggacacaaattcatcgagaacattggttac
gtgctgtacggggtttacaacgttaccatggttatagtgctgctcaacatgctcatcgcc
atgattaatagttccttccaggagattgaggatgatgctgatgttgagtggaagtttgct
cgggcgaaactttggttctcttactttgaggagggaaggacgctccctgtgccctttaat
ctggtccccagtccaaaatctatgctgggactggctacagccatcaagtccctgctcctg
cagtatgtggcaagacacagtgaggagaaaactgagacacagctcaaccagcttggagta
ggcaaaaattcaggatttggtgcttccatcagctcatccagatatcagatgatcatgaag
cgtctgataaagcgctacatcatcaaagcccaagcagacaaagagagtgacgagatcact
gaaggtgagctaaaagagattaagcaggacatctccagtctgcgatatgagctactggag
gagaaatcacagaacttggagacactggacggactgctgaggaggctgggagagatcacc
acaccttcagcagcttcagtagcactgccagtcgccccgacttatatataa
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