Perca flavescens (yellow perch): 114569613
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Entry
114569613 CDS
T07494
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 4 subunit alpha B-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pflv04040
]
114569613
Ion channels [BR:
pflv04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
114569613
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
114569613
NCBI-ProteinID:
XP_028455367
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Position
15:34389832..34483959
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AA seq
1787 aa
AA seq
DB search
MYHNSQTPAEGDKERRQGEETRRGRRLLGDGGVGAALHDASMAPVLPPVGSEIFRRFTPA
SLEEIQRRQEVEEKERQRRKEKNIEIAEEDLPKPASDLEAGKPLPFIYGDPPPQLFNTPL
EELDPFYQSQKTFIVIGKGNMIYRFNAEPACYLLSPFSRIRTVAIKILIHSLFSMFIMVT
IITNCVFMTMSDPPAWSKAVEYVFTFIYTFEAMIKVLSRGFCVGGFTFLKDPWNWLDFMV
ISMAYLTEFIDLGNVSVLRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADVMILTVFC
LCVFALIGLQLFMGNLRQKCVLIPPLFRSNHTSGIDLNTGYHGNDTXHGNRTGSGDFDYN
EYINNPDNFYFLPGQLDALLCGNSSDAGVCPEGYVCLKAGRNPNYGYTSYDSFGWAFLSL
FRLMTQDFWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVVAMAYAEQNEANMA
EAKQKEEEYAQILELLKTRKEEQAACRAEDSSADTNKHEQEHSAMEEFADEQRPCPPCWY
AFADIFLKWNCCGCWRWLKPWLYTIVMDPFVDLGITICIVLNTVFMAMEHYPMTEEFEEL
LSIGNLVFTVIFTAEMVLKLLAMDPYYYFQVGWNIFDSIIVTMSLVELGLANVEGLSVLR
SFRLMRVFKLAKSWPTLNMLIRIIGKSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKDC
VCRISLDCELPRWHMFDFFHAFLIIFRVLCGEWIETMWDCMEVAGQTMCLIVFMMVMVIG
NMVVLNLFLALLLSSFSGDNLAAPEEEGENNLQIAINRINMAMAWTKTWILQQIWTLTGK
QNHLDPEHTAVHGEEDDRTTKDCLVLTSMTLDQPGSEVKSLDCNHGNSHDVGCPRVPIAE
AESDFETPDNDEEEEDEVDKENEEKLSKCDGSSVCSTVQKLPDIQEDEDDEDDPNTPVDC
YSDKCYRRCPFLDIDTSQGRGKVWSNIRRTCFCIVEHNYFESFIIFMILMSSGALAFEDI
YLEQRRVIKMVLEYADQVFTYVFVVEMALKWVAYGFKTYFTNAWCWLDFLIVDVSLVSLT
ANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLI
FSIMGVNLFAGKFYHCFNETSEEMFLPEDVNNRSECFALIEANFSGIRWKNVKVNYDNVG
MGYLSLLQVATFKGWMDIMYAAVDSTDVESQPIYEANLYMYIYFVIFIIFGSFFTLNLFI
GVIIDNFNQQKSKLGGKDIFMTEEQKKYYNAMKKLGSKKPQKPVPRPENKFQALVFDLVT
TQVFDIFIMVLICLNMVTMMVETDEQSEDKVLILYWINLVFIVIFTGECSLKMTALRQHY
FSVGWNIFDFVVVILSIVGLLLADIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTL
LFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVRKEAMIDDMFNFETFGNSMICLFM
ITTSAGWDGLLSPIMNTPPDCDPDLENPGSTVRGDCGSPGIGIVFFTTYIIMSFLVVVNM
YIAIILENFNVATEESGDPLCEDDFEMFYETWEKFDPDASQFIQYSKLSDFCDTLKDPLR
ISKPNTIKLIHMDLPLVPGDKIHCLDILLALTAQVLGDAGGMDALKASMEEKFMANNPSK
VSYEPISSTLRRKQEDVAASVIQRAYRKHLLQRTLKLASYKYRAKMDGRGEAPPETEGLL
CQRISRLYGDEPGPRPVALQREFILHAAPPLNGTNFLRDENLRESVV
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgtaccacaacagccaaacacctgctgaaggagacaaggagaggagacaaggagaggag
acaaggagaggaaggcggttgctaggagacggtggagttggagcggcactgcatgatgcc
agcatggcgcctgtactaccccctgttggttcagagatcttcagacgcttcacgccagcc
tcgctggaggaaatccaacggcgacaggaagtggaggagaaggagcgccagaggaggaaa
gagaagaacatcgagattgcagaggaagatcttcctaaaccagccagtgatcttgaggct
gggaagcccctcccattcatctatggagacccgccccctcagcttttcaacaccccattg
gaggagctggatcccttctaccaatcacagaagacattcatcgtgattggtaaaggaaac
atgatctaccgttttaacgccgagccagcctgttacctgctgagtccattcagtcggata
aggaccgtcgctatcaagatcctcatccactctttattcagtatgttcatcatggtgacg
attatcaccaactgtgtgttcatgacgatgagtgatcctccagcgtggagcaaagctgta
gagtacgtttttacattcatctacacgtttgaagcaatgatcaaagttctgtcgagagga
ttctgtgtcggtggtttcaccttcctcaaagacccctggaactggctggacttcatggtc
atcagcatggcatacctgacagagtttatagatttgggaaatgtttctgtgctgaggacg
ttcagagttcttcgagctctaaagaccatcacagtcatccctggtctgaagacgattgtt
ggagctctgatccaatcagtgaagaagctggctgacgtcatgattctgaccgtgttctgc
ctctgcgtcttcgctctgattggtctgcagctcttcatgggaaacctgcggcaaaaatgt
gtcctgataccaccactgtttcgtagcaaccacacgtctggcattgacctcaacaccggt
taccatggcaatgacacannccacggcaacaggacaggaagcggtgactttgattacaac
gagtacatcaacaacccagataacttctacttcctgcctggtcaacttgatgctctgctg
tgtgggaacagctcggatgccggggtctgtccggagggttatgtctgtctgaaggcgggg
agaaacccaaactacggctacaccagctacgactcgtttggttgggcgtttctgtctcta
tttagactgatgacccaggacttctgggaaaacctcttccagctgacgctgcgagcagca
ggtaaaacctacatgatcttcttcgttgtcatcatcttcctcggctcgttctacctcatt
aacctcatcctggctgtggttgccatggcgtacgccgagcagaacgaggccaacatggcc
gaggccaaacagaaggaggaagagtacgctcagatcctggagctgctgaagacgagaaaa
gaagagcaggcggcctgcagagcagaggattcatctgcagacacaaacaaacacgagcaa
gaacattctgccatggaagagtttgctgacgaacagaggccgtgtcctccatgttggtat
gccttcgctgacatcttcctgaagtggaactgctgtggttgttggcggtggctcaaacca
tggctctacaccatcgtcatggacccgtttgtcgacctcggcatcaccatctgcatcgtc
ctcaacaccgtcttcatggccatggagcattatccaatgaccgaggagtttgaggagctt
ctgagcatcggaaatctggtcttcacagtgatcttcacagctgagatggtcctcaaactt
ctggccatggacccgtactactacttccaggtgggctggaacatctttgacagcatcatc
gtcaccatgagtctggtggagctcggactggcaaatgttgagggcctgtcggtgctgcgc
tccttcagactgatgcgagtgtttaagctggccaagtcgtggccgaccctcaacatgctg
ataaggatcattgggaagtcggtgggcgcgctggggaacctgacgctggtgctggccatc
atcgtcttcatcttcgccgtggttggcatgcagctgtttgggaagaactacaaagactgt
gtctgccgtatctcgctcgactgcgagctcccccgctggcacatgttcgacttcttccac
gccttcctcatcatcttcagagtgctgtgtggggagtggatcgagaccatgtgggactgc
atggaggttgccggccagaccatgtgtctgatcgtctttatgatggtcatggtcatcggg
aacatggtggtcttgaatctgttccttgctttgttgctgagctcgtttagcggagataat
cttgcggctccagaagaagaaggagaaaacaatctgcagattgccataaaccggatcaac
atggccatggcttggaccaagacctggatcctccaacaaatctggactttaacgggaaag
cagaaccacttggacccagaacacaccgcggttcacggtgaggaagatgacaggacgaca
aaggattgtttggttttgacctccatgaccttagatcagccggggtcagaggttaagtcc
ctcgactgtaaccatggcaacagccacgacgttggctgtccgagggtccccatcgcagag
gccgagtcggacttcgagacgccggacaacgatgaagaagaagaggacgaagtcgacaaa
gaaaatgaagaaaaactctccaaatgtgatgggtcgtcggtctgcagcaccgtccagaaa
cttcctgacattcaggaggacgaagacgatgaagatgatccaaacacacctgtggactgc
tacagtgacaagtgttaccgccgctgtccattcctggacatagatacatcccagggcaga
gggaaggtctggtctaacatcaggagaacctgcttctgcattgtcgaacacaactacttt
gagagcttcatcattttcatgatcctaatgagcagtggagctctggcgtttgaagacatt
tacctggagcagcgccgcgttataaagatggttctggagtacgcagaccaggtgttcacc
tacgtgttcgtggtggagatggctctgaagtgggtcgcctacgggtttaagacatacttc
accaacgcctggtgctggctcgacttcctcatcgtagacgtgtctctggtgtcactgaca
gcaaacatcctgggatactctgagctgggagccatcaagtctctgaggactctgagagct
ctgaggcccctgagggccctgtctcgctttgagggaatgagggtggtggtgaacgcgctg
gtcggagcgatcccgtccatcttcaacgtgttgctggtgtgtctgatcttctggctgatc
ttcagcatcatgggagtcaatttgtttgcaggaaagttttatcactgtttcaatgagacg
tctgaggagatgtttctccctgaagacgtcaacaacaggagcgagtgttttgctctgatc
gaggcaaacttcagcgggattcgctggaagaacgtaaaggtcaactatgacaacgtgggg
atgggctacctgtcgctgctgcaggtggccacgtttaaaggctggatggacatcatgtac
gcagcggtggacagcacagacgtggagtcccagccgatatacgaggccaatctctacatg
tacatttactttgtcatcttcatcatcttcggctccttcttcactctcaacctcttcatc
ggagttatcattgacaacttcaaccagcagaaatcaaagttgggaggaaaagatattttc
atgacagaggagcagaagaaatattacaacgccatgaagaaactgggctccaagaaacct
cagaaacctgttccacgaccggagaataagttccaggctctggtgttcgacctggtgacc
acgcaagtgtttgatatcttcatcatggtgttgatctgtctcaatatggtgacaatgatg
gtggagacggatgagcagagtgaggataaagtcttgatcctgtactggatcaacctggtc
ttcatcgtcatcttcaccggagagtgcagtcttaagatgacggcactccgccagcactac
ttctccgtcggctggaatatcttcgacttcgtggtcgtcatcctgtcaatcgtaggcctg
ctcctcgctgacatcatagagaagtattttgtctcgcccacgctcttccgtgtgatccga
ctggctcgtatcggccgggtccttcgtctcatccgtggagccaaggggatccggacgctg
ctgtttgccctgatgatgtcacttcctgcactcttcaacatcggcctgctactcttcctc
atcatgttcatcttctccatcttcggcatgtcaaacttcgcctacgtgcgtaaggaggcg
atgatcgacgacatgtttaacttcgagacgtttgggaacagcatgatctgtctttttatg
atcaccacgtcggccggctgggacgggctgctgagccccatcatgaacacgccgccagac
tgcgaccccgacctggagaacccaggctccacggtgcggggcgactgcggcagcccggga
attggcatcgtcttcttcaccacctacatcatcatgtccttcctcgtggtggtcaacatg
tacatcgccatcatcctggagaactttaatgtggcgacggaggagagcggcgacccgctg
tgcgaggatgactttgagatgttttatgaaacatgggagaagttcgaccctgacgcttca
cagttcatccagtacagtaaactgtcagatttctgcgatactctgaaggatcctctgagg
atttccaaaccaaacacaatcaaactgatccacatggatctgccgctggttcctggagac
aaaattcactgtctggacatcctgctggctctcaccgcccaggtgttgggtgatgccggt
ggaatggatgctcttaaagcaagcatggaggagaagttcatggccaacaacccctccaag
gtgtcgtatgaaccaatcagcagcactctgcggaggaaacaggaagatgtggcggcatca
gtgatccagagagcgtacaggaaacacctactgcagaggacgctcaaactggcgtcctac
aaatacagagcgaagatggatggacggggtgaggcgccgcccgagaccgaaggactgctc
tgccagcgaatcagccggctttatggagacgagccggggccccgcccggtggcgcttcag
agagagttcatcctccacgctgctcctccgctcaatggcaccaacttcctccgagatgag
aacctgagggagtcagtcgtctga
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integrated database retrieval system
