Perca flavescens (yellow perch): 114569772
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Entry
114569772 CDS
T07494
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03420
Nucleotide excision repair
pflv04110
Cell cycle
pflv04114
Oocyte meiosis
pflv04120
Ubiquitin mediated proteolysis
pflv04141
Protein processing in endoplasmic reticulum
pflv04310
Wnt signaling pathway
pflv04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114569772 (rbx1)
04120 Ubiquitin mediated proteolysis
114569772 (rbx1)
09124 Replication and repair
03420 Nucleotide excision repair
114569772 (rbx1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
114569772 (rbx1)
04350 TGF-beta signaling pathway
114569772 (rbx1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
114569772 (rbx1)
04114 Oocyte meiosis
114569772 (rbx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114569772 (rbx1)
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114569772 (rbx1)
Enzymes [BR:
pflv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
114569772 (rbx1)
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
114569772 (rbx1)
Multi subunit Ring-finger type E3
SCF complex
Ring finger protein
114569772 (rbx1)
Cul2 complex
114569772 (rbx1)
Cul3 complex
114569772 (rbx1)
Cul4 complex
114569772 (rbx1)
Cul7 complex
114569772 (rbx1)
Cul8 complex
114569772 (rbx1)
Cul9 complex
114569772 (rbx1)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
114569772 (rbx1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
114569772 (rbx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
114569772
NCBI-ProteinID:
XP_028455630
LinkDB
All DBs
Position
15:4932489..4934767
Genome browser
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagctatggatgtagatacgccaagcggcacaaacagtggagctagcaaaaag
cgatttgaagttaaaaagtggaatgctgtggcactgtgggcctgggacatcgtggtggat
aactgcgctatctgtcggaaccacatcatggatctctgtatagagtgccaggccaaccaa
gcttctgcaacctctgaggagtgcactgtagcctggggtgtctgcaaccatgccttccat
ttccactgtatttcccgctggctgaaaaccagacaggtgtgccctctggacaacagggag
tgggagtttcagaaatacggacactag
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