KEGG   Perca flavescens (yellow perch): 114569772
Entry
114569772         CDS       T07494                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
pflv  Perca flavescens (yellow perch)
Pathway
pflv03420  Nucleotide excision repair
pflv04110  Cell cycle
pflv04114  Oocyte meiosis
pflv04120  Ubiquitin mediated proteolysis
pflv04141  Protein processing in endoplasmic reticulum
pflv04310  Wnt signaling pathway
pflv04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    114569772 (rbx1)
   04120 Ubiquitin mediated proteolysis
    114569772 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    114569772 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    114569772 (rbx1)
   04350 TGF-beta signaling pathway
    114569772 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    114569772 (rbx1)
   04114 Oocyte meiosis
    114569772 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pflv04121]
    114569772 (rbx1)
   03400 DNA repair and recombination proteins [BR:pflv03400]
    114569772 (rbx1)
Enzymes [BR:pflv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     114569772 (rbx1)
Ubiquitin system [BR:pflv04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   114569772 (rbx1)
  Multi subunit Ring-finger type E3
   SCF complex
    Ring finger protein
     114569772 (rbx1)
   Cul2 complex
     114569772 (rbx1)
   Cul3 complex
     114569772 (rbx1)
   Cul4 complex
     114569772 (rbx1)
   Cul7 complex
     114569772 (rbx1)
   Cul8 complex
     114569772 (rbx1)
   Cul9 complex
     114569772 (rbx1)
DNA repair and recombination proteins [BR:pflv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      114569772 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      114569772 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 114569772
NCBI-ProteinID: XP_028455630
LinkDB
Position
15:4932489..4934767
AA seq 108 aa
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagctatggatgtagatacgccaagcggcacaaacagtggagctagcaaaaag
cgatttgaagttaaaaagtggaatgctgtggcactgtgggcctgggacatcgtggtggat
aactgcgctatctgtcggaaccacatcatggatctctgtatagagtgccaggccaaccaa
gcttctgcaacctctgaggagtgcactgtagcctggggtgtctgcaaccatgccttccat
ttccactgtatttcccgctggctgaaaaccagacaggtgtgccctctggacaacagggag
tgggagtttcagaaatacggacactag

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