KEGG   Perca flavescens (yellow perch): 114570361
Entry
114570361         CDS       T07494                                 
Symbol
smcr8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
  KO
K23611  guanine nucleotide exchange protein SMCR8
Organism
pflv  Perca flavescens (yellow perch)
Pathway
pflv04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    114570361 (smcr8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pflv04131]
    114570361 (smcr8)
Membrane trafficking [BR:pflv04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    114570361 (smcr8)
SSDB
Motif
Pfam: Folliculin
Other DBs
NCBI-GeneID: 114570361
NCBI-ProteinID: XP_028456452
LinkDB
Position
15:5038873..5047686
AA seq 927 aa
MIGSPDVVAFTKEDEYGQTPPDPWALPDEFSIPLHPLADSNPWAKTSYAKFTKDFILISE
FSEQVGPQPLLTIPDDPKVCGTFDLNYFSLRIMSVDYQASFVGHPPGSGYPRLSFVEDSR
VVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQFQELSLRFSQASES
LKAGNRRAFAKELQRKLRDLEYTHSVLQREEGLQREAGPQCMYSAHAVEKANELANVEKS
IYEHRDLLRQISSYHRRPRRDPHVVSCQKCINECLSECEQLLDKYAKLAKPFSYTAKGDT
GQKGRADGDGGEKEGDEEDDEGVKRRSSYTPQLIKGKSAKCFDKRLKTLQELCDVTFYEA
TVELLKKTERSFRGDLCYLYTRRLDRALRRKLKITNFLFEEDLGDDEDEDEGGTLRPFCA
VNHAVDNCTLLKPLPIVLGPEPPELDALEPPGPLDSASGTSHTQGSELGLVESHLESSPS
DQTLETQESSEETKGSFSSDKSEMGLAERQQNLESRKSEAPDPDSDLTPDPDHNPDLERE
SSSEEMETTAGDDEGDDTPVSLLEVASELEASREDECEGLTDAPCDIEPELLVPLDTACC
MAQEGFLYEASAPEAVQPCQALVVNEEPHALIPLQDDYTVGSPAAGLELPVGHLGDAVSR
TSAEDGSDCTMSASTGSDLGYGGVVTLRQRKKAGQGALRFVRQYPFAMQALWCLLSGRTL
VVLGADEGRVRRLVAALALFVPAPGKCGDRVQAWLSCPFTLTDLQRWKLIGLQRVASPVG
SSMLYSLSRYSRYISILDADQKTLRCPPYRGQLLANIADHRTSIRRGSTYFLHLQSTLCQ
LAAEAFLFTFTHHLHLPVSSTEGPEVVQGRRLCFLQEQLGLGEEDSQILLYLSQLITQQY
LQPATGSSAAAATCFSFNYTTSVLYKI
NT seq 2784 nt   +upstreamnt  +downstreamnt
atgataggctcacctgacgtggtggctttcactaaagaggatgagtatgggcagacccct
ccagacccctgggctctccctgacgagttctctattcctctccatccactggctgactcc
aacccctgggctaaaacctcctatgccaagttcaccaaagacttcatcctcatctctgag
ttctctgagcaggtgggccctcagcccctcctcaccatccccgatgaccccaaagtctgc
ggcaccttcgatctcaactacttctccctgcgcatcatgtcagtggactaccaggcctct
tttgtggggcatccacccggcagtggctacccaaggctcagctttgtggaggactcgagg
gtggtgctgggcgactcaaaggagggggcgtttgcctatgtccatcaccttacgctttac
gacctggaggcgaggggctttgtgcgaccgttctgtatggcgtacgtctcagcagatgag
aggaaaatcatgctgcagtttcaggagctgtccctccgcttctcccaggcctcggagagt
ctgaaggctgggaacaggagagcgtttgccaaggaactccagaggaagctccgagacctg
gagtacacccactctgtgctgcagagggaggagggcctgcagagggaggcggggcctcag
tgcatgtactccgctcatgccgtggagaaggccaacgagctcgccaacgtggaaaagagc
atctatgaacaccgagacctgctgagacagatcagctcctaccatcgccgtccgcgccga
gatcctcacgttgtcagctgccagaagtgcatcaacgagtgcttgagtgagtgcgagcag
ctgttagacaaatatgccaagctcgccaagcccttcagttacaccgccaaaggggacacg
gggcagaagggtcgggctgatggtgacggcggcgagaaagaaggggacgaggaggacgac
gagggcgttaaacgcaggtcgtcctacacgccgcagctgatcaaaggtaaatctgcaaag
tgtttcgacaagcgcctgaagaccctgcaagagctgtgcgacgttactttctacgaggcc
accgtggagctcctgaagaagacggagaggagtttccggggggacctgtgttacctgtac
acgcgccgcctggacagggcgttgcgcaggaaactgaaaataaccaacttcctgtttgag
gaggacctcggtgatgatgaggatgaggatgaagggggaactctaagaccattctgtgct
gtgaaccatgctgtagataactgtactctcttaaagccacttcctattgtgctaggacca
gaacctccagagctcgatgctctggagcctccaggtcctctagactcagcatctgggacc
agccatactcaagggagcgagctcgggcttgtggagagccatctggagtcctccccgtca
gaccagactctggagacccaggagagctccgaggagaccaaaggaagctttagcagcgat
aagagcgagatgggtcttgcagagaggcaacagaatctggaaagtagaaagtcagaagct
cctgatccagattctgacttgacccctgaccccgatcataaccctgacttggagagggag
agcagcagtgaagagatggagaccaccgccggggatgacgaaggagacgacacgcctgtg
tccttgctggaggtggcgtcggagctggaggccagcagggaggacgagtgtgagggatta
actgacgctccttgtgacatagagcccgagttgttggttcctctggacaccgcgtgctgc
atggcccaagagggtttcctttatgaggcttctgccccagaggcggtgcagccctgtcaa
gcactggtggtcaacgaggagccccacgctctaattccgctccaggacgactacacggtg
ggctctcctgcagccgggctggagctgcctgtggggcacctcggagacgcagtttctcgt
acctcggcggaggacgggtcagactgtaccatgagcgcttctacggggtctgatctcggc
tacgggggggttgtgactctgcgtcagaggaagaaggctggacaaggagccttgaggttt
gtgcgacagtaccccttcgccatgcaagctctgtggtgtctgctgagcggcagaaccctg
gtggtgctcggggcagatgaggggagagtccgccgactcgttgctgcgctggccctcttt
gtgccggctcctgggaagtgtggagacagggtccaagcctggctgtcctgccccttcacc
cttactgacctgcagaggtggaaacttattggactgcaaagagttgcgtcccctgtgggt
tccagcatgctttactcgctgtcccgctacagtcgctacatctccatcctggacgccgac
cagaagaccttgcgctgtccgccgtatcgtggccaactccttgccaacatagccgaccac
cgcacctccatccgccgcggttccacctacttcctccacctccagagcacgctctgtcaa
ctggcagccgaggccttcctgttcaccttcacccaccacctccacctgccggtcagctcc
acggaggggcccgaggtggtgcagggcagacgcctctgcttcctgcaggagcagctgggt
ctgggagaggaggacagccagatactgctctacctcagccagctcatcactcagcagtac
ctgcagcccgccaccgggagcagcgcagcagcagcaacttgtttcagttttaactacacc
accagcgttttatacaaaatctga

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