Perca flavescens (yellow perch): 114570361
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Entry
114570361 CDS
T07494
Symbol
smcr8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114570361 (smcr8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114570361 (smcr8)
Membrane trafficking [BR:
pflv04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
114570361 (smcr8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
114570361
NCBI-ProteinID:
XP_028456452
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All DBs
Position
15:5038873..5047686
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AA seq
927 aa
AA seq
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MIGSPDVVAFTKEDEYGQTPPDPWALPDEFSIPLHPLADSNPWAKTSYAKFTKDFILISE
FSEQVGPQPLLTIPDDPKVCGTFDLNYFSLRIMSVDYQASFVGHPPGSGYPRLSFVEDSR
VVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQFQELSLRFSQASES
LKAGNRRAFAKELQRKLRDLEYTHSVLQREEGLQREAGPQCMYSAHAVEKANELANVEKS
IYEHRDLLRQISSYHRRPRRDPHVVSCQKCINECLSECEQLLDKYAKLAKPFSYTAKGDT
GQKGRADGDGGEKEGDEEDDEGVKRRSSYTPQLIKGKSAKCFDKRLKTLQELCDVTFYEA
TVELLKKTERSFRGDLCYLYTRRLDRALRRKLKITNFLFEEDLGDDEDEDEGGTLRPFCA
VNHAVDNCTLLKPLPIVLGPEPPELDALEPPGPLDSASGTSHTQGSELGLVESHLESSPS
DQTLETQESSEETKGSFSSDKSEMGLAERQQNLESRKSEAPDPDSDLTPDPDHNPDLERE
SSSEEMETTAGDDEGDDTPVSLLEVASELEASREDECEGLTDAPCDIEPELLVPLDTACC
MAQEGFLYEASAPEAVQPCQALVVNEEPHALIPLQDDYTVGSPAAGLELPVGHLGDAVSR
TSAEDGSDCTMSASTGSDLGYGGVVTLRQRKKAGQGALRFVRQYPFAMQALWCLLSGRTL
VVLGADEGRVRRLVAALALFVPAPGKCGDRVQAWLSCPFTLTDLQRWKLIGLQRVASPVG
SSMLYSLSRYSRYISILDADQKTLRCPPYRGQLLANIADHRTSIRRGSTYFLHLQSTLCQ
LAAEAFLFTFTHHLHLPVSSTEGPEVVQGRRLCFLQEQLGLGEEDSQILLYLSQLITQQY
LQPATGSSAAAATCFSFNYTTSVLYKI
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgataggctcacctgacgtggtggctttcactaaagaggatgagtatgggcagacccct
ccagacccctgggctctccctgacgagttctctattcctctccatccactggctgactcc
aacccctgggctaaaacctcctatgccaagttcaccaaagacttcatcctcatctctgag
ttctctgagcaggtgggccctcagcccctcctcaccatccccgatgaccccaaagtctgc
ggcaccttcgatctcaactacttctccctgcgcatcatgtcagtggactaccaggcctct
tttgtggggcatccacccggcagtggctacccaaggctcagctttgtggaggactcgagg
gtggtgctgggcgactcaaaggagggggcgtttgcctatgtccatcaccttacgctttac
gacctggaggcgaggggctttgtgcgaccgttctgtatggcgtacgtctcagcagatgag
aggaaaatcatgctgcagtttcaggagctgtccctccgcttctcccaggcctcggagagt
ctgaaggctgggaacaggagagcgtttgccaaggaactccagaggaagctccgagacctg
gagtacacccactctgtgctgcagagggaggagggcctgcagagggaggcggggcctcag
tgcatgtactccgctcatgccgtggagaaggccaacgagctcgccaacgtggaaaagagc
atctatgaacaccgagacctgctgagacagatcagctcctaccatcgccgtccgcgccga
gatcctcacgttgtcagctgccagaagtgcatcaacgagtgcttgagtgagtgcgagcag
ctgttagacaaatatgccaagctcgccaagcccttcagttacaccgccaaaggggacacg
gggcagaagggtcgggctgatggtgacggcggcgagaaagaaggggacgaggaggacgac
gagggcgttaaacgcaggtcgtcctacacgccgcagctgatcaaaggtaaatctgcaaag
tgtttcgacaagcgcctgaagaccctgcaagagctgtgcgacgttactttctacgaggcc
accgtggagctcctgaagaagacggagaggagtttccggggggacctgtgttacctgtac
acgcgccgcctggacagggcgttgcgcaggaaactgaaaataaccaacttcctgtttgag
gaggacctcggtgatgatgaggatgaggatgaagggggaactctaagaccattctgtgct
gtgaaccatgctgtagataactgtactctcttaaagccacttcctattgtgctaggacca
gaacctccagagctcgatgctctggagcctccaggtcctctagactcagcatctgggacc
agccatactcaagggagcgagctcgggcttgtggagagccatctggagtcctccccgtca
gaccagactctggagacccaggagagctccgaggagaccaaaggaagctttagcagcgat
aagagcgagatgggtcttgcagagaggcaacagaatctggaaagtagaaagtcagaagct
cctgatccagattctgacttgacccctgaccccgatcataaccctgacttggagagggag
agcagcagtgaagagatggagaccaccgccggggatgacgaaggagacgacacgcctgtg
tccttgctggaggtggcgtcggagctggaggccagcagggaggacgagtgtgagggatta
actgacgctccttgtgacatagagcccgagttgttggttcctctggacaccgcgtgctgc
atggcccaagagggtttcctttatgaggcttctgccccagaggcggtgcagccctgtcaa
gcactggtggtcaacgaggagccccacgctctaattccgctccaggacgactacacggtg
ggctctcctgcagccgggctggagctgcctgtggggcacctcggagacgcagtttctcgt
acctcggcggaggacgggtcagactgtaccatgagcgcttctacggggtctgatctcggc
tacgggggggttgtgactctgcgtcagaggaagaaggctggacaaggagccttgaggttt
gtgcgacagtaccccttcgccatgcaagctctgtggtgtctgctgagcggcagaaccctg
gtggtgctcggggcagatgaggggagagtccgccgactcgttgctgcgctggccctcttt
gtgccggctcctgggaagtgtggagacagggtccaagcctggctgtcctgccccttcacc
cttactgacctgcagaggtggaaacttattggactgcaaagagttgcgtcccctgtgggt
tccagcatgctttactcgctgtcccgctacagtcgctacatctccatcctggacgccgac
cagaagaccttgcgctgtccgccgtatcgtggccaactccttgccaacatagccgaccac
cgcacctccatccgccgcggttccacctacttcctccacctccagagcacgctctgtcaa
ctggcagccgaggccttcctgttcaccttcacccaccacctccacctgccggtcagctcc
acggaggggcccgaggtggtgcagggcagacgcctctgcttcctgcaggagcagctgggt
ctgggagaggaggacagccagatactgctctacctcagccagctcatcactcagcagtac
ctgcagcccgccaccgggagcagcgcagcagcagcaacttgtttcagttttaactacacc
accagcgttttatacaaaatctga
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