Perca flavescens (yellow perch): 114573155
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Entry
114573155 CDS
T07494
Symbol
otof
Name
(RefSeq) otoferlin
KO
K19949
otoferlin
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114573155 (otof)
Membrane trafficking [BR:
pflv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
114573155 (otof)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
114573155
NCBI-ProteinID:
XP_028460920
LinkDB
All DBs
Position
18:complement(20175120..20253050)
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AA seq
1995 aa
AA seq
DB search
MALMVHLKTVVHLRGKGDRIAKVIFRGLSFYSRVAENCEEVAHFNEVFRWPIASRLDGNE
MLEIQVYNYSKVFSNRLVGTFCMVLQKVAEEGHLELTDTLIDDNNTSIKTSVTIEIRYQS
MDGTVGVWSDGEFLDVPDDRDGMFAFETDSLLSGQSHGSGTSPGRSLQGSIPTFRKAGKG
VFSAMKLGKIKSSKDDHKRGDEPAVLDMEDLDRKAMRLAGALDPDTISLASVTAVTTNVS
NKRSKPDIKMEPSSGRPVDYQINITVIEARQLIGLNMDPVVCVEIGDDKKYTSMKESTNC
PYYNEYFVFDFHVPPDVMFDKIIKLSVIHSKNLLRSGTLVGTFKMDVGTVYSQPEHQFYH
KWAILSDPEDITAGCKGYVKCDIAVVGKGDNIKTPHKANETDEDDIEGNLLLPDGIPVER
QWARFYVKIYRAEGLPKMNTSIMANVKKAFIGENRDLVDPYVQVQFAGQKGKTSVQKSSY
EPIWNEQVVFTELFPPLCKRMKVQIRDSDKVNDVAIGTHFVDLRKISNEGDKGFLPTLGP
AWANMYGSTRQYTLMDEHQDLNDGLGEGVSFRARLLLSIAVEILDTTSPELMSSTEVQVE
GVSNISESATGKIDEFFLFGSFLEATMIDRKIGDKAISFEITIGNYGNQIDGVSKPLSAK
KKKKDGENEEEESDLIQNSSEDEADEDGDLVSVSSTPPMKPVITDRNYFHLPYFEKKPCV
YIKSWWQDQRRRLYNSNMMDKIADKLEEGLNDVQEVIKTEKAFPERRLRGVLEELSVGCS
RFVTLANKDVNQAGRTKLDRERLKSCMREMDSMGQQAKQIRTQVKKNTIRDKLKLVQNFL
QRLRFLADEPQHSIPDVFIWMMSNNKRIAYARIPSKDILYSIVDEETGKDCGKVKAVFLK
LPGKKGFGPAGWTVQAKLELYLWLGLNKQRKDFLSGLPNGFEEIKSAKMGPCLHSVPPVS
LIYNMKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLSETLCPTWDQLL
VFDDVELFGEASELRDDPPIIVIEIFDQDTVGKAEFIGRAFAKPTIKMCDEHYGPPRFPP
QLEYYQIYRGNCTAGELLAAFELLQVGQGGIADLPSLEGPTDSERGPILPVPLGIRPVLS
RYRIEVLFWGLRDLKRINLAQVDRPRVDIECAGRGVQSVLIQNYKKNPNFSILVKWFEVD
LPENELLHPPLNIRVVDCRAFGRYILVGSHAVTSLRRFIYSTPDKTSNNWATAGDIIVNM
DTDPSVRKMDTVVKLDAMSDAVVKVDMTEEESDKEKKKKKKKKKGGVEEEDETNERVLDW
WSKYFASIETLKETLRAQDVAQAEAEEREDLEIAAEAADIKPDDLLLKGSKTKEKSKEKK
SSKDKKKGHAADGSEKRTVKARVDELMVYDKELDSEFGNFEDWLHTFNLYRGKAGDDDER
TLDDDRIVGRFKGSLCMYKLPLSEEITRETGFDPSMGMFQSIPRNDPINVLVRVYVVRAT
DLHPADINGKADPYVVIKLGKSEIKDKENYISKQLNPVFGKSFDIEARFPMESMLTVSVY
DWDLVGTDDLIGETKIDLENRFYSKYRATCGISSNYSVHGYNVWRDPMKPSQILAKLCKD
GKIDGPHYGPGGKVKVANRIFQGPTEIEDENGLKKQTEEHLALTVLNHWEEIPRVGWKLV
PEHVETRPLLNPDKPGIEQGRIEMWVDMFPMDMPAPGPAIDISPRKPKRYELRVIIWNTD
EVILEDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFVFPFDYLMA
EEKIVISKKESMFSWDETEYKIPPRLTLQVWDADHFSADDFLGAIELDLNRFPRGAKTAK
QCSLDMIRNEQELPTISIFKQKRVKGWWPFVARDENDEMELTGKVEAELHLVTAEEAEKC
PVGLGRNEPDPLEKPNRPDTTFLWFLSPLKAIRYLVCNRYKWLIIKIVLALLLLVMLGLF
LYSMPGYLVKKLLGA
NT seq
5988 nt
NT seq
+upstream
nt +downstream
nt
atggctctaatggttcacctgaagacggtcgttcaccttcggggaaaaggtgacaggatc
gccaaagttatattcagaggtctttccttctacagccgtgtggcagagaactgtgaggaa
gtggcccactttaatgaggtatttcgatggcctattgccagcagactggatggaaacgag
atgctggagatccaagtgtacaattacagcaaagttttctccaacagactggtggggact
ttctgtatggtacttcagaaggtggctgaagagggacacctagagctgaccgacacactc
atcgacgataacaacacgtcaataaagaccagcgttaccatagagattagataccagtcg
atggatggcacagtgggagtgtggagcgacggggagttcctggatgttcctgacgaccgt
gacgggatgtttgcctttgaaacagacagcctgctgtcaggacaaagccacgggtcgggc
acgtctcctggacggtccttacagggatccatacccaccttcaggaaagcagggaaggga
gttttctcagccatgaagcttggcaagatcaagagctctaaggacgatcacaagagagga
gatgagccagcggtcctggacatggaggacctggacaggaaggccatgcgtcttgctgga
gcactggacccagacacaatctctctggcctctgtcaccgctgtcaccaccaacgtctcc
aataaaaggtcaaagccagatatcaagatggagccgagctctggacgcccagtggattat
cagatcaacatcacagtgatcgaggcccggcagctgataggcctcaacatggaccctgtt
gtgtgcgtggagattggagacgacaagaagtacacatctatgaaggagtccaccaactgc
ccgtactacaatgagtattttgtctttgacttccacgtccctcctgatgtcatgtttgac
aagattatcaagctctccgttattcactctaaaaatcttcttcgaagtgggacattggtg
ggaaccttcaagatggatgtgggcactgtttactctcagcctgaacatcagttttaccac
aagtgggccatcctatctgatcctgaagacataacagcggggtgtaaaggatatgtaaag
tgtgacatcgctgtggttgggaaaggtgacaacatcaagaccccacacaaggccaacgag
accgatgaagatgacatagaggggaacctcctgctaccggacggcatcccagtagagagg
cagtgggcgaggttttatgtgaagatctaccgtgctgaagggcttcctaaaatgaacacc
agtatcatggctaatgtgaagaaggccttcataggagagaaccgagacctggtggacccc
tatgttcaagtgcagtttgctgggcagaaagggaagacttcagtccagaagagcagttat
gaaccgatctggaacgagcaggtcgtgttcactgagctcttccctccactctgcaaacgc
atgaaggtccagatacgagactcggataaggtcaacgacgtcgccataggaacccacttt
gttgatctacgcaagatatcaaatgaaggtgacaaaggtttcctgcccaccttgggtcca
gcttgggccaacatgtacggttccacccgtcagtacactctgatggatgagcaccaggac
ctgaatgatggtcttggagaaggcgtgtccttcagagcccgtctcctgctttccatcgct
gtggagatcctggacaccacttcccctgagctcatgagctccactgaggtgcaagtggag
ggcgtctccaacatctcagagagcgccactgggaaaatagatgagttcttcctctttggt
tccttcctggaggccaccatgattgacaggaagatcggtgacaaagcgataagttttgaa
attacaataggtaactatggaaaccagatagatggtgtaagcaagcctttgtcggcaaag
aagaagaaaaaagatggggagaatgaagaagaggagagcgatctcatacagaactccagt
gaggacgaggcagacgaggacggggacctggtctctgtctcctctactcctccaatgaag
cccgtcatcaccgacagaaattacttccatcttccctactttgaaaagaagccatgtgtc
tacatcaaaagctggtggcaggaccagagaagacgactttacaactccaacatgatggac
aagatcgctgacaagctggaagagggtttgaatgatgttcaggaggtcattaagacggaa
aaggcttttccagaacgcagactcaggggagtgctcgaggagctcagcgtcggttgcagt
cggtttgtgactctggctaacaaggatgtgaaccaggcaggccgaactaaactggatcga
gagcggctcaagtcctgcatgagagaaatggacagcatgggccagcaggccaagcagatc
cgaactcaggtgaagaaaaacacaatccgagacaaactcaagctggtgcagaacttcctg
cagaggctgcgttttcttgcagacgagcctcagcacagcatcccagatgtttttatctgg
atgatgagcaacaacaagcgcattgcctatgcccggattccttccaaagacattctctac
tccatagtggatgaggaaacgggaaaagactgcggcaaagtcaaagctgtcttcctcaag
ctgcctggtaagaagggatttggccctgcaggctggacagttcaggctaagctggagttg
tatctgtggcttggcctcaacaaacaaaggaaggactttctcagtggtctgcctaatggt
tttgaagagatcaaatccgctaaaatgggcccctgtcttcactctgtcccccccgtcagc
ctcatctacaacatgaagcaggtgtttcagctgagagcacacatgtaccaggcccgcagt
ctgtttgctgcagacagcagtggcctttctgatcctttcgctcgggtcttcttctccaca
cacagccaggttactgaggtcctgagcgagactctttgtcctacctgggaccagctgctg
gtgtttgatgatgtggagctgttcggtgaggccagcgagctgagagacgaccctccaatc
attgtcattgaaatctttgaccaggacactgtgggcaaggcagaattcataggtcgggca
tttgcgaagcccaccatcaagatgtgtgacgagcactacggccccccgaggttcccaccc
cagctggagtactaccagatttacagagggaactgcactgccggggaactgctggctgcc
tttgagctgctgcaggttggtcaaggagggatagccgatctcccttcccttgaagggccg
acagactcagagcgtggacccattctgcctgtgccgttgggcatccgacctgtcctgagt
cgctaccgcatagaggttttgttctggggcttaagggacctgaagaggattaacctggct
caggtggatcggccccgtgtggacatagagtgtgcaggtagaggtgtgcagtctgtcctc
atccagaactacaagaaaaaccccaacttcagcatcctagttaaatggtttgaggtggac
cttccagagaatgaactcctccacccccctctcaacatccgggtggtggactgccgggca
ttcggtcgttacatcttggttgggtcccatgctgtcaccagcctgagacgtttcatttac
agcaccccagacaagacctccaacaactgggccactgcaggtgacatcatcgtcaacatg
gacacagacccttccgtccgaaagatggacacggttgtcaagttagacgctatgtctgac
gctgttgtaaaagttgacatgactgaggaggagagtgacaaagagaaaaagaagaagaag
aagaaaaagaagggtggagtggaggaagaggacgagaccaatgagagagtgctggactgg
tggtccaaatattttgcttcaatagagacattgaaggagacgctcagagcccaggacgtg
gctcaggcagaggcggaggagagagaggacctggagatagctgcagaggcagcagatata
aaacctgatgaccttcttctgaaaggctccaagacaaaggaaaagagcaaagagaagaag
agctccaaggacaagaagaagggtcacgctgcagacggctctgagaaacgaacggttaaa
gcaagagtggacgagctgatggtgtacgacaaggagctggatagtgagtttggcaacttt
gaagactggctccacactttcaacttgtacagaggaaaggctggggatgacgacgaacgc
actctggatgacgacaggattgttggcagattcaagggatccttatgtatgtacaagcta
cctctgtcagaggagatcacaagagagacaggattcgatcctagtatgggcatgttccag
agcatcccgcgtaacgatccaatcaacgtccttgtccgtgtctatgttgtcagggctaca
gatcttcatcctgctgatatcaatgggaaggctgatccatacgttgtcatcaagctgggc
aagtcagagatcaaggataaagagaactacatctccaaacagctcaatcctgtatttggc
aaatcatttgacattgaggccagattccccatggagtccatgctaacggtgtctgtgtac
gactgggacctggtcggcactgatgacctgatcggagagacaaagattgacttggagaat
cgtttctacagcaaatacagagccacctgcggcatctcatccaactattctgtccatgga
tacaatgtttggcgggaccctatgaagcccagtcagatcctggccaagctctgtaaggac
ggcaagatcgatggacctcattatgggccgggagggaaagtcaaggtggccaatcgaatt
ttccagggacctacagagatcgaggatgaaaatggtctgaagaagcagactgaggagcat
ttggctctgacggtgctgaaccactgggaggagatcccgagggtgggctggaagctcgtc
cctgaacacgtggagaccaggcccctgctgaaccccgacaaacccggcattgaacagggc
cgtattgagatgtgggtggatatgtttcctatggacatgcctgctcctggacctgcaata
gatatatcaccacgtaaaccaaagagatatgagctcagggtgattatttggaatacagac
gaagtaatactggaggacgatgattacttcactggggaaaagtccagtgacatatttgtc
aggggatggctgaaaggacagcaggaggacaagcaggacaccgatgtgcattatcactct
ctgactggtgagggcaactttaactggcgcttcgtcttccccttcgattacctcatggct
gaggagaagatcgtcatctctaagaaagagtccatgttctcttgggatgagactgaatat
aagatcccgcctcgcctcacgctgcaggtctgggatgccgaccacttctctgccgatgac
ttcctgggtgctattgagttggacctaaaccggttccctcgtggtgccaagacagccaag
cagtgttcccttgacatgatccgaaatgagcaggagctgcccaccatttctatcttcaaa
caaaagagagtcaagggctggtggccgtttgtagcgcgcgatgagaacgatgagatggag
ctcacgggtaaggtagaagctgagcttcatctggtgacagcagaggaggcggagaaatgt
cctgtaggattgggacgaaatgagcctgatccactggaaaaaccaaatcgcccagacacc
accttcctttggttcctgagcccgctgaaagccattcgctacctggtgtgcaaccgctac
aagtggctgatcatcaagatagtgctggccctgctgctgctcgtcatgctgggcctcttc
ctctacagcatgccgggctaccttgtcaagaagctgctgggggcctaa
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