Pseudomyxococcus flavus: VZL07_08750
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Entry
VZL07_08750 CDS
T11142
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pfly Pseudomyxococcus flavus
Pathway
pfly03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VZL07_08750 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfly03400
]
VZL07_08750 (nth)
Enzymes [BR:
pfly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
VZL07_08750 (nth)
DNA repair and recombination proteins [BR:
pfly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VZL07_08750 (nth)
Prokaryotic type
VZL07_08750 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
XSE97990
LinkDB
All DBs
Position
2102457..2103170
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AA seq
237 aa
AA seq
DB search
MARESPLSGPAATPPRPDKAPFDITEVLGRIRETVRHFADAAMFALAARGHDSLFEQLVA
CILSIRTRDEVSLPVSLALLQRASTPDALARMSPEAIDAIIQPVTFHEPKARQLHAIAVR
TRDAFGGVLPCDAQVLQSFKGVGPKCAHLALGIACGHEAISVDIHVHRVTNRWGYVQART
PEATMEALEARLPRDYWVEINRLLVPFGKHVCTGTRPKCSTCPVLEFCQQVGVKDAR
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgcgagtccccgctgtccggacccgcggccacgccgccccgtccggacaaggcc
cccttcgacatcaccgaggtgctgggccgcatccgcgagacggtgcgccacttcgcggac
gcggcgatgttcgcgctcgccgcccgggggcatgactcgctcttcgagcagctcgtcgcc
tgcatcctctccatccgcacgcgtgacgaggtcagcctgcccgtctcactcgccctgctc
cagcgcgcctcgacgccggacgccctggcgcgaatgtcccccgaggccatcgacgccatc
atccagcccgtcaccttccatgagcccaaggcccggcagctccacgccatcgccgtgcgg
acgcgcgacgccttcggcggcgtgctgccatgtgacgcccaggtgctccagtccttcaag
ggcgtgggccccaagtgcgcgcacctggcgctgggaatcgcgtgcggccacgaggccatc
agcgtggacatccacgtccaccgcgtgacgaaccgctggggctacgtgcaggcgcgcacg
cccgaggccacgatggaagccctggaggcccggctcccccgcgactactgggtggaaatc
aaccggctgctggtgcccttcggcaagcacgtctgtacgggcacgcggccgaagtgctcc
acgtgcccggtgctcgagttctgccagcaggtgggcgtgaaggacgcgcgctga
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