Pseudomonas fluorescens Pf0-1: Pfl01_4399
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Entry
Pfl01_4399 CDS
T00283
Name
(GenBank) putative radical SAM-superfamily protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Pathway
pfo00790
Folate biosynthesis
pfo01100
Metabolic pathways
Module
pfo_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
Pfl01_4399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfo03016
]
Pfl01_4399
Enzymes [BR:
pfo01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
Pfl01_4399
Transfer RNA biogenesis [BR:
pfo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Pfl01_4399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ABA76136
UniProt:
Q3K7W8
LinkDB
All DBs
Position
complement(4960372..4961019)
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AA seq
215 aa
AA seq
DB search
MQDTLRITEVFYSLQGETRTAGLPTVFVRLTGCPLRCQYCDSAYAFSGGTIRTLDDILEQ
VAGFRPRYVCVTGGEPLAQPNAIPLLKRLCDAGYEVSLETSGALDISAVDPRVSRVVDLK
TPDSKEAHRNRYENIDLLTPNDQVKFVICSREDYDWAVSKLIQYGLERRAGEVLFSPSHH
DLNARDLADWVVADNLPVRLQLQLHKYLWNDEPGR
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacacattgagaattaccgaagttttctactcgttgcagggggaaacgcggact
gccgggctgcccactgtttttgtgcgcctgaccggttgcccattgcgttgccaatactgc
gacagcgcctacgcgttcagcggtggcacgatccgtaccctcgacgacatcctcgagcaa
gtggccggctttcgcccgcgctacgtctgtgtcacgggcggtgagccgctggcacagccc
aatgccatccctttgctcaaacggttgtgcgatgccggctacgaagtctcgctggagacc
agcggcgccctcgacatctcggcggtcgatccacgggtcagtagggtggtcgacctgaag
acgcctgactccaaagaagcccatcgcaaccgttacgagaacatcgatctgctgacgccc
aacgatcaggtgaagtttgtcatctgctcgcgggaggactatgactgggcggtatcgaag
ctgatccagtacggtcttgagcgacgtgcaggtgaagtgctgttttccccaagtcaccac
gacctgaacgctcgggatctggcggactgggtggtggcggataacctgccagtgcgcctg
caactgcagctgcataaatatctatggaatgatgagccggggcgctga
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