Pseudomonas fluorescens Pf0-1: Pfl01_4513
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Entry
Pfl01_4513 CDS
T00283
Symbol
nth
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Pathway
pfo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pfl01_4513 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfo03400
]
Pfl01_4513 (nth)
Enzymes [BR:
pfo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Pfl01_4513 (nth)
DNA repair and recombination proteins [BR:
pfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pfl01_4513 (nth)
Prokaryotic type
Pfl01_4513 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ABA76250
UniProt:
Q3K7K4
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All DBs
Position
5088734..5089372
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AA seq
212 aa
AA seq
DB search
MNAAKRLEIFRRLHEDNPEPKTELAYSSPFELLIAVILSAQSTDVGVNKATAKLFPVANT
PAAIHALGVEGLSEYIKTIGLYNSKAKNVIETCRLLVELHNGEVPQTREELEALPGVGRK
TANVVLNTAFRQLTMAVDTHIFRVSNRTGIAPGKNVVEVEKKLMKFVPKEYLLDSHHWLI
LHGRYVCLARKPRCGSCRIEDLCDYKHKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgcaaaacgtctggagattttccgcaggcttcacgaggacaaccccgagccc
aagaccgaactggcctactcctcgcccttcgaactattgattgcggtgattctgtccgcg
caatccacggacgtcggggtgaacaaggcgacggcgaagctgtttccggtggcgaacaca
ccggcggccattcacgccttgggcgtcgaagggttgtccgagtacatcaagactatcggc
ctctataacagcaaggccaaaaacgtgatcgagacctgccgcctgctggtcgaattacac
aacggggaagtcccgcagacgcgtgaagaactggaagccttgcccggcgttggccgcaag
accgccaacgtcgtgctcaacaccgcgttccgccagttgaccatggccgtggacacccac
atcttccgggtcagcaaccgcaccggcattgcaccgggtaaaaatgtggtcgaggtggaa
aagaagctgatgaagtttgtgccaaaagaatacctgctcgactcgcaccactggctcatt
cttcacggacgctatgtgtgtctggcacgcaaaccccgttgtggcagctgtcggattgaa
gatctgtgcgattacaagcacaaaacttctgacgattga
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