Poecilia formosa (Amazon molly): 103142149
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Entry
103142149 CDS
T07984
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103142149 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfor03041
]
103142149 (eftud2)
Spliceosome [BR:
pfor03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103142149 (eftud2)
Complex C
U5 SnRNP specific factors
103142149 (eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Roc
Ras
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
103142149
NCBI-ProteinID:
XP_007558104
Ensembl:
ENSPFOG00000008515
UniProt:
A0A087XSB5
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDDDDDDLDAEDRDIDEGDEDEEDEPANEDENVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKHKQFTLMEQELPATVYDMEFLAD
LMDGTELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSMRISDGVVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDENLVVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYNEFAKRLWGDIYFNPKTRKFTKKAP
TSNSQRSFVEFVLEPLYKILSQVVGDVDTTLPRVLDELGIHLTKEELKLNIRPLLRLVCN
RFFGEFTGFVDMCVQHIPSPQEGAKIKIDHTYTGGLDSDLGEAMAECDPDGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLDDEEDSQICTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatttgtatgacgagtttggtaattacatcggtccagagctggactctgat
gatgatgacgatgatctggatgcagaggacagggacattgatgagggggatgaagatgaa
gaagatgagcctgcaaatgaggatgagaacgtacctggcatggaggtggtcctgcatgag
gacaagaaatactatcccacagcagaggaggtttacgggccggaagtggaaactattgtc
caggaagaagacacacaaccgcttactgagcccatcatcaagccagtcaagcacaagcag
ttcacattgatggagcaggagttacctgccactgtttatgacatggagtttctggcagat
ttgatggacggtaccgagctgatccgtaacgtcaccctctgtggtcacctccaccacggc
aagacgtgttttgtggactgcctgattgagcaaactcatcctgaaatcagaaagagggat
gatgtcgatcttcggtacacagacatcctgttcactgagcaggagcgaggggtcggcatc
aaaagcactccagtcacgatggtgctgccagactccagaggaaaatcctaccttttcaac
atcatggatacaccaggccatgtgaacttctctgatgaggtcacatccagcatgaggatc
tccgatggagttgtcctcttcatcgatgcagctgaaggagtgatgctgaacacggagcgc
ctgatcaaacatgcagtccaggagcgcatggccatcaccatctgcatcaacaaggtggac
cggctcattgtcgagctcaaactgccgccaacagatgcttattataaacttcgacacatt
gtggacgaggtcaacggtttgctcagtacttactccacagacgagaacttggtggtgtct
ccgctcctcgggaacgtttgcttcgccagctctcagtacagcatctgcttcaccctgggg
tccttcgccaagatctactcagacacctacggtgacatcaactataacgagtttgcaaag
cggctttggggagacatttatttcaaccccaaaactcgtaagttcacaaagaaggctccc
accagtaactcccagcgcagctttgtggagtttgtcctggagcctctttacaagatcctc
tcacaggtggttggggatgtggacaccaccctgccccgggttctggatgaacttgggatc
cacctgaccaaggaggagctgaagctgaacatcaggcctctgctccggctggtctgtaac
cgtttctttggagagttcaccggttttgtggacatgtgtgtgcaacacatcccctcacca
caagagggtgctaaaataaagatagaccacacatacacaggaggactggactctgacttg
ggagaagccatggcggaatgtgatcctgatggtcccttgatgtgccacaccactaagatg
tacagcacagaggacggggtccagttccatgccttcggcagggttctgagcggtaccatt
caggcaggtcagccggtcaaggttctgggagagaactacacgctggatgacgaggaagac
tcgcagatttgcactgtgggtcgcctctggatctctgttgccagataccaaatcgaagtg
aaccgagttcctgcgggaaactgggttctgatcgaaggctgcgaccagccgatcgtgaag
acggccaccatcacagaaccacgggggaacgaagaggctcagattttcaggccgttaaag
tttaacacggcttcggtcatcaagatcgccgtggagcccgtcaacccgtccgagcttccc
aagatgttggacggactgaggaaagtcaacaagagctacccgtctctaaccacaaaggtg
gaggagtctggagagcatgtcatcttagggacaggagagctttatctggattgtgtcatg
catgatctgaggaagatgtactcagaaatcgacattaaagttgctgatcctgttgtgacc
ttttgtgaaacggtggttgagacgtcgtctcttaagtgctttgctgagacgcccaacaaa
aagaataagatcaccatgatcgctgagcctctggagaaggggctcgccgaggacatcgag
aacgaagtggtgcagatcacgtggaacaggaagaagctgggagagttcttccagacgaag
tacgactgggatctgctggctgccaggtctatctgggcctttggaccagacacaacgggg
ccaaatattctcgtggatgacacgcttccttcggaggtggacaaagctttacttggttca
gtcaaagacagcatcgttcagggattccagtggggcaccagggagggacctctgtgtgat
gagcctattagaaatgtgaagtttaagatcctggatgccgtcatcgctcaggagcctctc
cacagaggaggaggtcaggtcatccccacagccaggagggtggtctactccgcctttctc
atggccactccaaggttaatggagccgtattactttgtggaggtccaggctccagctgac
tgtgtgtctgccgtctacaccgttctggcgagaagaagaggtcacgtcacccaggatgcg
cccatacccggctctcctctgtacaccatcaaggctttcatcccggccatagactcgttc
ggctttgagaccgaccttcgcacacacacacagggtcaggccttcgcgctgtctgtgttc
caccactggcagattgttcccggtgacccgctggacaagagcatcgtgatccggcccctc
gagcctcagcccgccccccacctggcccgagagttcatgatcaagaccagaagacgcaag
ggtctgagcgaagatgtgagtatcagcaagttcttcgacgatcccatgttgttggagttg
gcgaaacaggacgtggtgcttaattatccgatgtga
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integrated database retrieval system
