Poecilia formosa (Amazon molly): 103143240
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Entry
103143240 CDS
T07984
Symbol
lsm3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03018
RNA degradation
pfor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103143240 (lsm3)
09123 Folding, sorting and degradation
03018 RNA degradation
103143240 (lsm3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfor03019
]
103143240 (lsm3)
03041 Spliceosome [BR:
pfor03041
]
103143240 (lsm3)
Messenger RNA biogenesis [BR:
pfor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103143240 (lsm3)
mRNA degradation factors
5'-3' decay
Lsm complex
103143240 (lsm3)
Spliceosome [BR:
pfor03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
103143240 (lsm3)
Complex C
U2 snRNP components
103143240 (lsm3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
RimP_C
Glutaredoxin
Motif
Other DBs
NCBI-GeneID:
103143240
NCBI-ProteinID:
XP_007559760
Ensembl:
ENSPFOG00000008372
UniProt:
A0A087XRD2
LinkDB
All DBs
Position
Unknown
AA seq
102 aa
AA seq
DB search
MADEVEQQPTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTVEIDEETYEELYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagttgagcagcaaccaactaccaacacagtcgaagagccgcttgacctg
atcaggctcagtttggacgagcggatctatgtcaagatgaggaacgaccgggagctccgg
ggccgtctgcatgcctatgatcagcacctgaacatgatcctgggggacgtggaggagacg
gtgacgaccgtggagatcgatgaggagacgtatgaggaactctacaagtctacaaagagg
aacatccccatgctgtttgtcagaggcgacggcgtggttctggtagctccgccactcagg
gtgggctga
DBGET
integrated database retrieval system
