Poecilia formosa (Amazon molly): 103153387
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Entry
103153387 CDS
T07984
Symbol
brca1
Name
(RefSeq) breast cancer type 1 susceptibility protein
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03440
Homologous recombination
pfor03460
Fanconi anemia pathway
pfor04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103153387 (brca1)
09124 Replication and repair
03440 Homologous recombination
103153387 (brca1)
03460 Fanconi anemia pathway
103153387 (brca1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pfor01009
]
103153387 (brca1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pfor04121
]
103153387 (brca1)
03036 Chromosome and associated proteins [BR:
pfor03036
]
103153387 (brca1)
03400 DNA repair and recombination proteins [BR:
pfor03400
]
103153387 (brca1)
Enzymes [BR:
pfor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103153387 (brca1)
Protein phosphatases and associated proteins [BR:
pfor01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103153387 (brca1)
Ubiquitin system [BR:
pfor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103153387 (brca1)
Multi subunit type E3
BRCC complex
103153387 (brca1)
Chromosome and associated proteins [BR:
pfor03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103153387 (brca1)
DNA repair and recombination proteins [BR:
pfor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
103153387 (brca1)
BRCA1-A complex
103153387 (brca1)
BRCA1-B complex
103153387 (brca1)
BRCA1-C complex
103153387 (brca1)
BRCA complex
103153387 (brca1)
FA (Fanconi anemia) pathway
Downstream FA components
103153387 (brca1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-Nse
RING_XB3-XBAT31
RTT107_BRCT_5
zf-RING_5
zf-MIZ
zf-ANAPC11
zf-RING_6
zf-rbx1
zf-RING_10
zf-RING_4
PTCB-BRCT
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
103153387
NCBI-ProteinID:
XP_016517391
Ensembl:
ENSPFOG00000004731
UniProt:
A0A087XFZ2
LinkDB
All DBs
Position
Unknown
AA seq
1316 aa
AA seq
DB search
MATPKATDVRKGISVLWETLQCPICLDLMSAPVSTKCDHQFCKFCITKLLDNSKQNRANC
PVCKFKITKRSLQESPGFQRLVAGLQEMIQAYEHDTCTNYFTGLPQQRKNTKNTETSKHA
CDLSFGDASGFEQDNKGTEHQNDSPQSSSSTVAAQNGFAQLMGLEDSASITAENEGLDSG
LGDVPPTSDKKMSDNLESETANVGKNTTDASKNKRQKRKPEKSSDYLDSTQEEPGQQDVQ
KSSRKKQKKDLEHNKILEQKKKKSLEKVAEWLLKVPAEEELELEKPLHSEDESDSSSSTS
TLVVEPKNVESNPKRERRGKALEEQVFGIIYKRRGNKVTEPLIAKEIETCNRSSKLKNNN
ARLCEEQQIVENDTGCDFFKEPEQMAVEEKLDETVEELNQKESDKYQGEHEVPVADIVQP
ETTPPTRRTRKSLQQPDGDLQDENQLKSKGTNEKSDCRKEKNSKLSRKKPTKVAKPLVLV
EVQDREASPKPSERVKEVEVQIETYPSSEEQTTPVMKSARRSRRLQLFVDEVQGSHKKTT
SEATATKTDKVAKKQSDKTMDATPSKNGNLTKEAKRNGCVSEEDISVIESVGKRGGMSSM
QAEAEIPEALTLAKPECIVSVVPNSTSPTDPSIVGPTLEGEKQENNHPPGSQQETFANVE
EYEDGKNDSELDTEQLLQSFKAAKRKSFLLGDPNAKRSRGLDVENTEGSQHNCSSSEISE
NINQALKSTCSDVISPSNSPSKIRKPDQALLDASNPTGNCPSRSSVSSGLSPNKVAKRDR
DSPLSVVPQVVDSGLRFTGVEQEAETASQSDYNLTEIPGGISKCPSENKTETIFVGESSL
TPAQEVKEANGSGEVSTQSSIQTNKKKKKKRKTQRLEYSSESSSSSKEELPTLAQILGTS
DCPQAEIKHQGEISEAIRLEGVDEEPLGRPAGSLTPDQLDSSQASVDLFGTPEECDAPEN
CVGVSFESSQFSSEVLVTQQKIEMQKELVRLEKLMALVSEVLQEKEGSPAAGTNQGCEDR
GPELGGQDQVQSSDRKGILDAETKASDDKVAERGGFPGPAVQDSTHAESTVKDTKAPNSL
SAAKKAKTCDSPPDCQEDKENNSPPKEKSTAKLVLVSSGLGPNEQIMVKKFAKRVGGLVV
SRVTPEVTHVIMRTDDQLVCERTLKYFLGIAGRKWVVSFQWISECFKEKKLLEEHSFEVR
GDVVNGPNHQGPLRARTAGDSNLLMKGYRICFQGPFTDMSTDELEWMVELCGAAVVKDPL
VLDGEQKSHQIVVVQPRSDSSSSYSGLSRSATVVTRGWLLDSVATYTLQNYSSYTV
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccaaaggccacagatgtcagaaagggaatctcagtcctctgggaaactctt
caatgtcccatttgcctggatttaatgtctgcaccggtttctactaaatgtgatcaccag
ttttgcaaattttgtattacaaagcttttggacaactccaaacagaacagagccaactgc
ccagtgtgtaaattcaagataacaaagaggagcctgcaggagagccctgggttccagaga
cttgttgcaggacttcaggagatgatacaagcatatgaacacgacacctgcacaaactac
ttcactggactgccacagcaaagaaagaacactaaaaatacagaaacaagtaaacatgct
tgtgatttatcatttggagatgcatctggatttgaacaggacaataagggaactgaacac
caaaatgattctccacagtccagctcctcaactgtagcagctcagaatgggtttgctcag
ctcatgggacttgaagattctgcgtctataacagcagaaaacgaaggtctggatagtggc
ctgggtgacgtcccaccaacatctgacaagaaaatgtcagataacttagagtcagaaacg
gcaaatgttgggaaaaacacaacggatgcgtctaaaaacaaaaggcagaagcggaaaccg
gagaagtcctctgactatttagattcaactcaagaggaacctggtcaacaggatgtccaa
aagtcctctagaaagaaacagaaaaaggatttggagcacaacaagattcttgagcagaaa
aagaagaaaagtttggagaaagtcgcagagtggctcctcaaagttccagccgaagaagag
ctggaactagagaaacccctccacagtgaagacgaatcggatagcagttcgtctacatca
acgctggtcgttgagccgaaaaacgtcgaatcgaatcctaagagagaacgtcgcggcaaa
gcccttgaagagcaggtttttggcatcatctacaagcgaagaggaaacaaagttacagaa
ccactaatagctaaagaaatagaaacttgtaatagatcttcaaagctgaagaacaacaac
gcccgtctttgtgaagagcaacaaatagtagaaaatgacaccggctgtgacttttttaaa
gaaccggaacagatggcagtcgaggaaaagcttgatgaaactgtggaggagttgaaccag
aaagaaagcgacaaatatcagggggaacacgaggttcctgttgctgatatcgtacaaccg
gaaactacaccaccaacgagaaggactcgcaaaagtctgcaacagcctgatggcgattta
caagacgaaaatcagctgaaatcaaaaggtaccaacgagaaaagcgattgtcggaaagaa
aaaaattctaagttaagcagaaagaaaccaactaaggtggcaaaacctcttgtgttggtc
gaagttcaggatagggaagcaagtcctaaacccagtgaaagagttaaagaagtcgaagtt
caaatagagacttatcccagcagtgaggaacagacgactccagtcatgaagagcgccaga
agaagcagaaggcttcagctttttgttgacgaggttcagggaagtcacaagaaaacaacc
tctgaagctactgcaactaaaacagacaaagtcgctaaaaagcaatctgataaaacaatg
gatgctactccatctaaaaatggaaaccttacgaaggaagctaaaagaaacggatgtgtt
tctgaggaggatatcagcgtgatagaaagtgtaggaaagaggggaggaatgtcttcaatg
caagctgaagcagagatacccgaagcgctaacgctagctaaacctgagtgtatcgtctct
gtggtcccgaactccacaagtccaaccgatccatccattgtcggtccgacgcttgaaggt
gagaagcaggagaataatcacccacctggctctcagcaggaaacatttgctaacgttgaa
gagtacgaggatggcaagaacgacagcgagctggacacagagcaacttctccaaagcttc
aaagctgccaaacggaaatctttccttcttggggaccccaacgcaaagagaagtcgcggt
ttggatgtagaaaacactgaagggagccaacataactgttcaagctctgaaatatcagaa
aatataaaccaggctttaaaatcgacttgtagtgacgtgatttccccttccaactcgccc
agtaagattagaaaaccagatcaagctctactggacgcctccaaccctactgggaactgt
ccatccaggagcagcgtcagcagcggtctcagtccaaacaaagtggcaaagcgtgacaga
gacagtcctctctctgtcgtccctcaggttgtggactctggcctccgcttcacaggtgtt
gagcaggaagcagaaacggcttcccagagcgactacaacctgacggagatcccaggcggc
atttcaaaatgtccttcagagaacaaaactgagacaatttttgttggagaatcttcttta
accccagcccaagaggtcaaggaagccaacggcagcggagaagtcagcactcaatcctcc
atccagaccaacaagaagaagaagaagaagaggaagactcagaggctggagtattcatcc
gagtccagcagctcatctaaagaggagttaccgactttggctcagatcttgggaacatca
gattgtcctcaagctgagattaaacatcagggagaaatcagcgaagccatcagattggag
ggagtcgatgaggaaccgctgggtcgtccagctggaagtctgaccccagatcagctcgac
tccagccaggcatccgtcgacttgttcggcacacctgaggaatgtgacgcccctgaaaac
tgcgtcggcgtttcctttgaatcgtcacaattctcaagcgaagttcttgttactcagcaa
aagatagaaatgcagaaggagctggtgaggctggagaagctgatggctctcgtgtcagag
gtgcttcaggagaaagaaggcagtcctgctgcaggaaccaatcagggctgtgaagacagg
ggccctgaactgggtggccaggatcaagtccagagttcagacaggaagggtattttagat
gcagaaaccaaagcatctgatgataaggtggcagagcgtggtggctttccaggacccgct
gttcaagattcgactcatgctgaatcaactgtaaaagacacaaaggcccctaattcactt
tctgcagccaaaaaggcaaaaacttgtgattcacctccagattgccaagaagacaaagaa
aacaacagccctccgaaagaaaaatctacagctaaacttgttctggtgtcgtccggattg
ggcccaaacgagcagataatggtgaaaaagtttgccaagagagtcggcggtctcgtcgtt
tcccgggtgacaccagaggtgacgcatgtcataatgcgcacagatgatcagctggtctgc
gaacggacactgaaatacttccttggcatcgcgggtcggaaatgggtcgtcagcttccag
tggatttctgaatgcttcaaggaaaagaaactgttggaagagcattcgtttgaagtgaga
ggcgatgtggtgaacggaccgaaccaccaggggccgttaagagcccgcaccgcaggggac
agtaatctgctcatgaagggatacaggatctgcttccaggggccgtttaccgacatgtcg
acagatgagctggagtggatggtggagctgtgtggcgctgctgtagttaaagacccactt
gtccttgacggcgaacagaagtcccaccagatcgtcgttgttcagcccagatccgactcg
tcttcctcctacagcggtctgtccaggagcgccacagtcgtgacccgcggttggctgctg
gattcagtcgctacgtacacgctgcagaactacagcagctacaccgtgtga
DBGET
integrated database retrieval system
