Poecilia formosa (Amazon molly): 103155839
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Entry
103155839 CDS
T07984
Symbol
lig4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103155839 (lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfor03400
]
103155839 (lig4)
Enzymes [BR:
pfor01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103155839 (lig4)
DNA repair and recombination proteins [BR:
pfor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
103155839 (lig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
103155839
NCBI-ProteinID:
XP_007577754
Ensembl:
ENSPFOG00000000797
UniProt:
A0A087X4Q7
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MEGTSKSGAAAAEPSVAAQVPFLHLCTTLEKIQKSKLRPDKSKILGDFIESWRKFHAALH
KDNPKTTDSFYPSMRLIVPPFERERMAYGIKESMLAKLYIDVLGLPKNGPEASKLLNYRA
PTTSQGEAGDFAGMAYFVLKKRCTSQGNLSIKEVNDFLDSVAINNASKQKDQVKKSLLHL
ITQSSALEQKWLIRMILKDMKLGVSKETVLQVFHPDAAELYNVNTDLKKVCQQLHDPSVS
LSEVSIELFSAFKPMLAAVANIRNIEKQMGNSPFYLETKLDGERIQLHKDGDVYKYFSRN
AFEYTQQFGGSPLEGSLTPYIHNVFKSNVVNCILDGEMMAFNPTAGTFMQKGSKFDIKRL
MDDSELQTCFCVFDVLLVNNQKLGKEPLKKRYEVLQTVFTPVKGRIHVVPKTEMGTMQDV
VNALNDAIDNREEGIMVKDPLSIYKPDKRGEGWLKIKPEYVDGLMDELDLLIVGGYWGKG
RRGGMMSHFLCGIAEAPKPGEKPSVFHSFCRIGSGYTMKELYDLGLKLAKHWKVYRKNDP
PASILCGVEKPEVYIEPCNSVIIQVKAAEIVGSDMYKTNCTLRFPRIEKIREDKEWHQCM
TLAELDQFRSKASGKLASRHLHIDGDEPQKKKRKLPVKPKKVVGVIDHFKPQDLSGVSKE
TDMFEDVEFCILNGTEGHPKSELEKGVARCGGIVVQNPGRDTYCVVAGVENMRVKNLISS
NQHDVVWASWLLECLDQKEVVPWQPRHMIHMSPSTREHFAKEYDSYGDSYFVDTDEQQLR
EVFSRIDGEQAAAAAVSAAQVEERYGWDDLPTSMFRPFTFYFDILDPKSATGATCLDIRA
LEVRYHGGTVAKALEEGVSHVVVEEETRLLELRTLRRRFRKKFKIVRDSWVTDSIAAGHL
IDDADYLV
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggagggaacgtccaaaagcggagcggctgctgcagagcccagcgttgctgctcaggtt
cctttccttcacttgtgcacaactttagagaaaatccagaagtccaaactccgtccagat
aaatccaagatccttggggatttcattgaatcatggcggaaatttcatgccgcgctccac
aaggacaacccaaaaactacagactccttctacccttctatgcgcctcatcgtcccgcct
tttgagcgggagcgaatggcttacggcatcaaagagagcatgctagccaagctctacatt
gatgttttaggcctcccaaagaatggcccagaagccagtaagctcctgaactaccgtgct
ccgactacatcccaaggagaagcgggggatttcgccggcatggcgtactttgtgctgaag
aagcgatgtaccagccaaggaaacctcagtatcaaagaggtcaatgactttcttgactca
gtggccatcaacaatgccagcaagcagaaggatcaggtgaaaaagagcctgttgcacctc
atcacacagagctctgctctggagcaaaagtggcttattaggatgattctgaaggacatg
aagcttggagtcagcaaggaaactgttctccaggtcttccacccggacgccgcggagctc
tacaatgtcaacacggacttaaagaaggtgtgccagcagctgcacgacccctctgtgtct
ttaagcgaagtctcgattgaactcttctctgccttcaagccaatgttggcagcggtggcc
aacatccgcaacatcgagaagcagatgggcaacagccccttctaccttgaaacgaagctg
gatggggagcggattcagcttcacaaggacggagacgtgtacaagtacttcagccggaac
gcgtttgaatacacgcagcagttcggaggatcgccactcgaaggatcgctcactccttac
atccacaacgtgttcaaaagtaacgtcgtaaactgcatcctggatggcgagatgatggcg
ttcaacccgacggcagggaccttcatgcagaaagggagcaaatttgacatcaagagactg
atggacgactctgagctgcagacgtgcttctgtgtctttgacgtgttgctggttaataac
caaaaactcggtaaagaaccgctgaagaagcggtatgaggtcctccagacggtcttcacc
cctgtcaagggtcggatacatgtggtgccaaagacagaaatgggaaccatgcaagatgtt
gttaatgctcttaacgatgccattgataacagggaagaagggattatggtgaaggaccct
ttgtccatctacaaacctgataaacgaggggagggttggctgaaaataaagccggagtat
gtggacggcttgatggatgagctggacctgctgattgttggtggttactgggggaaaggg
agacggggcgggatgatgtcccactttctgtgtggaatcgcagaagcgccaaagcctggt
gagaagccgtcggttttccactccttctgccgaattggctcgggttacaccatgaaagag
ctgtacgaccttgggctgaagcttgcgaagcattggaaagtctaccggaaaaatgacccg
ccggcgtccatcctctgtggagtggagaaaccggaggtgtacatcgagccctgcaactcg
gtcatcatccaggtcaaagcggccgagatagtcggaagcgacatgtacaagaccaactgc
accctgcggttccccaggatcgaaaagatccgcgaggacaaggagtggcaccagtgcatg
actctggcagagctggatcagttccgcagcaaggcgtccgggaaactggcctcgcggcac
cttcacatcgacggcgacgaaccacagaagaagaagcggaagctgcctgtcaaacccaag
aaggtggttggagtcattgaccacttcaagccccaggacctgtccggggtttccaaggag
acggacatgtttgaggatgtggagttctgcatcctgaacggcactgaaggtcacccaaag
tcagagctggagaagggcgtggccaggtgtggcggcattgtggtccagaacccgggacgg
gacacctactgcgtggttgccggcgtggagaacatgcgcgtgaagaacctgatttcctcc
aatcagcacgacgtggtctgggcgtcatggctgctggagtgcctggatcagaaggaagtg
gtgccgtggcaaccgcgccacatgatccacatgtcgccctcgaccagggaacacttcgcc
aaggagtacgacagctacggcgacagctactttgtcgatacggacgagcagcagttgagg
gaagtgttcagcaggatcgacggtgagcaggcggcggcggcggccgtcagcgcggcgcag
gtggaggagcgttacggctgggacgacctccccaccagcatgttcagacccttcaccttt
tactttgatatcttggatccgaaaagcgcaacaggtgctacctgtctggacatcagggcg
ctggaggttcgataccacggagggacggtggcgaaggcgctggaggaaggagtttcccac
gtcgtcgtcgaggaagagacgagactcctggagctgaggacgctgaggcgccgcttcagg
aagaagtttaagatcgttagagactcatgggtgaccgactccatcgcggcagggcatctg
atagacgatgccgactacctggtttga
DBGET
integrated database retrieval system
