Pseudozyma flocculosa: PFL1_01349
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Entry
PFL1_01349 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K01855
tRNA pseudouridine38/39 synthase [EC:
5.4.99.45
]
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfp03016
]
PFL1_01349
Enzymes [BR:
pfp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.45 tRNA pseudouridine38/39 synthase
PFL1_01349
Transfer RNA biogenesis [BR:
pfp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PFL1_01349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
HEXIM
Motif
Other DBs
NCBI-GeneID:
19315474
NCBI-ProteinID:
XP_007877042
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MASGARLPLSLPPSPLRALRPRLPWARPSPDSSTDLGGLSRHPPDTRRSSSTLPERINIR
RLRHTMDVHERYQSWSKQNLVQRIAELEAQALQHKGPSPAPSAGSAVPQAQDGGQEQDGH
GAAAAAPSTSKKRVRPGKKDKVAREFDISNHPCRKIALRFSYEGSGYSGLAAQNGPQGAA
SPLPTVEAVLWEALATARLVDPKASMEAAGWTRCGRTDRGVSAAGQVVSFWIRSKKVDEW
PLRRQQEREREEALARRAGQLPSDGATKVDSVATPSSEAADPAQSEPSPARGAVKLESEE
LPYVAMLNRILPPSIRVQAWSPVRPDFSARFDCTYRHYKYFFTAGPSSLLFPATERGADE
ARAKRLDIAAMRGAARRLLGEHDFRNLCKIDASKQITNYRRRIDGVDIDLVSRGWPSAST
GRPSDADVGEHDEPLYVLNLRGTAFLYHQVRNIMAVLFLVGARLERPEVVDELMNVERGQ
IARDRIQMRAAALKGVRQTANSAEPSAGPSQGRGGDEAEDAASKWWLPFRATASAGENKE
WGRPQWMDTALSWTDDSSANDDDDDDDALAVYDTKPNYEMASDRPLVLWECGFLPSDIGW
RAGTFDGPLMERDDHEDDDESNNSNKLTAAAEGQGDGGDEESARIASSTVQGLHELWTQM
SIKAELQRHFILASASPRTGRLACRTEFESGRWPVFDEGRSIGVERAQSDSVAPAATTAT
TATTRKQGYIPLGYGIERGALRYIPLDKRTREEGFEEKNRRWLDTTGKRRAEREQTKAAD
PATPVDDDE
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcatccggagcgcgcctgccgctatcgctgccaccatcgccgctgcgcgctctccgc
ccccgcctcccctgggctcgaccctcgcctgactcatcgacagaccttggcggcctctcc
cgacacccgcctgatacacgtcgatccagctccacgcttccggaacgcatcaacatccgc
aggctcagacacacgatggacgtccacgagcggtaccagtcgtggtccaagcagaacctc
gtgcagcgcatcgctgagctcgaggcacaggccctgcagcacaagggcccgtcgcccgct
ccttctgccggctcagctgttcctcaggctcaggatggagggcaagagcaggacgggcac
ggcgcggcggcggcggcgccttccacgtcgaaaaagcgcgtgaggccgggcaagaaggac
aaggtggctcgcgagttcgacatctccaaccacccgtgccgcaagattgcgctgcgcttc
tcttacgaaggcagcggctacagcggactggccgcccagaacggcccacagggcgctgcg
tcgcccctcccgaccgtcgaggcggtgctgtgggaggcgctcgccaccgcccggctggtc
gacccaaaggccagcatggaggccgccggctggacccgctgcgggcgcacggataggggc
gtgtcggctgccgggcaggtcgtgtcgttctggattaggagcaaaaaggtcgacgagtgg
cctctgcggcggcagcaggagagggagcgggaggaggcgctcgcacgccgggccggccag
ctcccctcggacggtgcgacgaaagtggacagtgttgcgacaccgtcgtccgaagcggcc
gaccctgcacagtctgagccatcacctgcccgcggcgccgtcaagctcgagtccgaggag
ctgccctacgtggcgatgctcaaccggatactgcctccctcgatccgggtgcaggcttgg
tcgccagtgcggcccgacttctccgcccgcttcgactgcacctaccggcactacaagtac
ttcttcaccgccgggccctcgtcgctcctgttccccgccaccgagcgaggcgccgacgag
gcgagggccaagcgcctcgacattgccgcgatgcggggtgccgcccgccgcctgctcggg
gagcacgacttccgcaacttgtgcaagatcgacgcctccaagcagatcacaaactaccgc
aggaggatcgacggcgtcgacatcgacctcgtctcgcgcggctggccctcggcttcgacc
gggcggccgtcggacgccgatgtcggcgagcacgacgagccgctctacgtcctcaacctg
cgcggtaccgcattcctctaccaccaggtccgtaacatcatggccgtcctcttcctcgtc
ggcgccaggctcgagcggccggaggtggtcgacgagctgatgaacgtcgagcgcggtcag
atcgcccgcgaccggatccagatgagggcggccgcgctcaagggcgtccggcagacggcc
aactctgctgaaccttcggcgggcccgtcgcaaggccggggcggtgacgaggcggaagac
gcagcgagcaagtggtggctgcccttccgtgccactgcgtccgcgggtgagaataaagag
tgggggcggccacagtggatggacacggcactatcgtggaccgacgactcttccgccaac
gacgacgacgacgacgacgacgcgctggctgtctacgacaccaagccgaactacgaaatg
gcctcggaccggcctctggtgctgtgggagtgcggcttcctgcccagcgatattggctgg
cgcgccggcacctttgacgggccgctgatggagcgcgatgaccacgaggacgacgacgag
agcaacaacagcaacaagctcacggccgccgcggaaggacagggcgacggcggcgacgag
gagagcgctcggatagcatcgtcgacggttcagggcttgcacgagctgtggacgcagatg
tcgatcaaggccgagctacagcgccactttatcctggcctcggcctcgccgcggacgggc
aggctggcgtgccgcaccgagtttgagagcggacggtggcccgtgtttgacgaggggcgc
tcgattggcgtcgaacgggcgcagtcggactcggtggcgccggcggcgacgacggcgacg
acggcgacgacgaggaagcaaggctacatcccgctcgggtacggcatcgagcgaggcgcg
ctgaggtacatcccgctcgacaagcgtaccagggaagagggcttcgaggagaagaaccgg
cgctggctcgatacgacgggcaagcggagggcggagcgcgagcagaccaaggcggcggac
ccggccacccccgtcgacgacgacgagtga
DBGET
integrated database retrieval system
