Pseudozyma flocculosa: PFL1_04534
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Entry
PFL1_04534 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFL1_04534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfp03400
]
PFL1_04534
Enzymes [BR:
pfp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
PFL1_04534
DNA repair and recombination proteins [BR:
pfp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PFL1_04534
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
19318635
NCBI-ProteinID:
XP_007880251
UniProt:
A0A061H5Q4
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MDSPDTPPPRLPAHFAHSYAYTLPASPSPSPSPSARAPRRSPRKPVPTVPYASLVAPSSS
PEPHARSSAASTSRTRSHSADPSASASPSKKRKRIKRTVDDPASAEGSKYAQYHGVPDHI
SPRNHVLLCGINPGLTSSALQHHFAGPTNHFYPVLHQSGLTSRRFRPDEDHTFPTLRPFS
LGLTNIGQRPTVEASELPRHEMDAGVPVFLRKVDRWRPRTVAFVGKGIAEVVSKCLKRCP
PGHDGSEGAARITLDIPTSMLLAFDPDAAAQGARGSRTKSTRNKGETPPKRKSVKKDDVK
DDSGYGLLPFVFVHRRQGASSNTDTVVADPSRPLVDIANIKVESNATSGDAIKVEEGRSS
RDPCAAVLNRDTTSLPAQPSSTTDTDVAGEGDVYDDLTFFFVSPSTSARVTTHFLNDKAQ
ILRHLARFLEFLSRRHRRRAGASASDDIKVEPDVEDDETRRVEFRCIDLDTLTFLEARSV
PLLPAATTAKVEEKREEEEDVDVDELIDDDDDDDDNGGIASPS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggactcgccagacacaccaccgcccaggctacccgcccactttgcgcattcctacgcc
tacacgctacccgcctcgccctcaccttcgccttcgccctcagcccgcgcaccacgacgc
agcccacgcaaacccgtccccaccgtcccctacgcctccctcgtcgcaccgtcgtcgtcc
ccagagccacatgcgcgctcctcggcagcctctacctctcgaacccgctcgcactctgcc
gatccatccgcctccgcttcgccctcaaagaagaggaaacgcatcaagcgcacagtcgac
gaccccgcatctgcagagggaagcaagtacgcccagtaccatggcgtgccggaccacatc
tcgccgcgcaaccacgtcctgctgtgcggcatcaaccccggtctgacctcgtcggcgctc
caacaccactttgcagggcccacaaaccacttctaccccgtcctacaccagtccggcctc
acctcgcgccgcttcaggcccgacgaggaccacaccttccccaccctccgccccttttcc
ctcggcctgaccaacatcggccagcgccccacggtagaggcgtcggagctgccccgacac
gagatggacgccggcgtgcccgtatttctccgcaaagtggaccggtggcggccgcgcacc
gtcgcctttgtcggcaagggcatcgcagaggtcgtgtccaagtgcctcaagcgctgtccc
cccggccatgatggaagtgagggggcggcgaggatcacgttggatatccccacatctatg
ttgctcgctttcgatcccgatgccgccgcacaaggcgccagggggagcaggacaaagtcg
acgaggaacaagggcgagacgccgcccaagaggaagagcgtaaagaaggacgacgtcaag
gacgacagcgggtacggcctcctgccctttgtctttgtccaccgtcgtcaaggagcatcc
tccaacaccgacaccgtcgtcgcagatccatcacgacctctcgtcgacatcgccaacatc
aaggtggagtctaacgccacctctggcgatgcgatcaaggtcgaagagggacgctcgagt
cgagacccttgcgccgccgtcctgaatcgcgatacgacctctcttcccgcccaaccctcg
tcgacgacagacaccgacgtcgccggggagggggacgtgtacgacgatctgacttttttc
ttcgtatccccctcgacttcggcgcgggtcacgacccactttctgaacgacaaggcccag
atactgcgtcaccttgctcgcttcctcgagttcctctcccgtcgtcatcgtcgtcgtgcc
ggcgcatccgcatccgacgacatcaaggtagaacccgacgtggaagacgacgagacgaga
cgcgtcgagttccgatgcatcgacctcgatacgctcacctttctcgaggcacgtagcgtc
ccgttgcttcccgccgccacgacggccaaggtggaagagaaaagggaggaggaggaggac
gtggatgtggatgaattgatcgacgatgacgacgacgacgacgacaacgggggcatcgct
tcgccttcgtag
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integrated database retrieval system
