Pseudozyma flocculosa: PFL1_06538
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Entry
PFL1_06538 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K15083
DNA repair protein RAD16
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfp03400
]
PFL1_06538
DNA repair and recombination proteins [BR:
pfp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
PFL1_06538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_4
zf-RING_14
ERCC3_RAD25_C
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
19320611
NCBI-ProteinID:
XP_007882272
UniProt:
A0A061H0Y0
LinkDB
All DBs
Position
Unknown
AA seq
1154 aa
AA seq
DB search
MAPPPGPRRSSRQSISRGQGSAASGSDGRDELDMLGDDARTATTPSPELGRGSQRASFAS
SAGSTTPATIASNISSARASGTVTPATSIDDAEEVLLPVPASKASASRTGPVKGAFSPTN
QPPAVKFEAGHAFVEIPSHTSSQRSTRASTRASVPTRSALKRSTSAAGDAAAAPSTKSTG
KRKIEAIVISSSSDDEAEKQRQPQPPLRPAKRSRTSIGGSSSMRKFDEDKYKDGDDINDD
EDDETEDETEWYMAAKFTPKAAKGKGQTKAMAKGKGKIVKGVDEDPHEDADVKAAPPATQ
QRSALQRTSRRSTAAAAAAAAPAMKGDSDGDEELVALSLELASEGVSDVPEPASVATKSK
GRRAAANAASIKTKAKAALDEYQVDDDNSGSDSDFEPVGYSKRASRSARQARLKRDIDID
SDASSLDGSDDSELSDEDAPLAAGSSAGPSTGLAAGSMREEQQYETAKQRAARLRSERRQ
ARLKNKNVRSQYEKNKRALVAHHPELKDVWEKLRDGVAVIKPEQAEQPAGLNIKLLPFQR
EGLDWLKRQEAGPWKGGMLADEMGMGKTIQMISLMLSDRQKPCLVLAPTVAIMQWRNEIE
QYTEPRLKVELWHGANRTQDADRLRRADVVLTSYAVLESCYRKQETGFQRKKMRVKEDSV
LHAIHWRRIILDEAHNIKERATNTAKGAFALKGDFRWCLSGTPLQNRVGELYSMIRFLGG
DPYAFYFCKKCPCKSLHWQFSDRRNCDSCGHTPMHHTCFWNNEILKPIQKNGAEQGEGKD
AFGRLRLLLERMMLRRTKLERADDMGLPPRTIEVRRDLFNEEEEDLYTSLYSDTTRKFST
YLDQGTVLNNYSNIFTLLTRMRQIANHPDLVLRSQSGVSNRLLGEQQDEHHVCKICADVA
EDAIMSRCRHVFCRECVRQYLETDLPPDAGAPDCPYCHATLSIDLEGEALEPPQPLNNAS
DGGRSGRQGILSRLDMDQWRSSTKIEALVEELTQLRAEDKTIKSLVFSQFVNFLDLIAFR
LQRAGFQICRLEGNMSPEARNKTIKHFMENPNVTVFLVSLKAGGVALNLTEASRVYLMDP
WWNPSVEVQAMDRIHRLGQHRPIIVKRMIIENSIESRIIELQNKKSAMIEAAIGKDESAM
GRLSVADLRFLFTL
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccgccgggacctcgccgctccagccgtcagtcgatctcgcgtgggcagggc
agcgctgcgtccggctcagacggcagggacgagctcgacatgctgggcgacgatgcacga
acggcgacgacgccgtcgcccgagctgggccgcggtagccagcgagcctctttcgcctcg
tcggcaggctcgaccacgccggccaccatcgcctccaacatctcgtcagcccgcgcctcg
ggaaccgtgactcctgccacgtcgatcgacgacgccgaggaagtgcttttacccgtgccg
gccagcaaggcatcggcgtcgcgtaccgggcctgtcaagggcgccttcagcccgaccaac
cagcctccggccgtcaagttcgaagctggccacgccttcgtcgagatcccttcccacact
tcctcgcagcgatccacccgagcctcgacgagggcgtcagtacccacgcgcagcgccctc
aagaggtcgacttctgcagcaggcgatgccgcggccgctccctccaccaaatcgaccggc
aagcgcaagatcgaggcgatcgtcatcagcagcagttctgacgacgaagcagagaagcag
cgacagccgcagcccccgctgcgccctgccaagaggagcaggacttcaatcggcggcagc
tcatcgatgcgcaagttcgacgaagacaaatacaaggatggcgatgacatcaacgacgat
gaggatgacgagaccgaggacgagactgagtggtacatggcggccaaattcacgcccaag
gccgcgaagggcaaaggccagacaaaggccatggcaaagggcaaaggcaagatcgtcaag
ggtgtggacgaggatccgcacgaggacgccgacgtcaaggctgcgccgcctgccacgcag
cagcgatccgcgcttcagcgcaccagcaggcgttcgacggcagccgctgctgccgctgct
gcccccgccatgaagggggacagtgacggcgatgaggagctagtcgcgctgtcgcttgag
ctggcgtccgagggcgtatcggatgtccctgaacctgcttcggttgctaccaagtccaag
ggacgccgtgccgccgccaacgcggcctccatcaagaccaaggccaaggctgcgctcgac
gagtaccaggtcgatgacgacaattcgggatccgacagcgatttcgagccggtcggctac
agcaagcgtgcttcgcgctcggcccgccaggcacgcctcaagcgcgacatcgacatcgac
tctgatgccagctccttggacggctccgacgacagtgagctgagcgacgaggacgctccg
ctcgccgctggctcgtcggctggcccgtcgaccggcctcgccgccggcagcatgcgcgag
gagcagcagtacgagacggccaagcagcgtgcggcgcgcttgcggagcgagaggcgccag
gcgcgcctcaagaacaagaacgtccgcagccagtacgagaagaacaagcgcgcgctcgtg
gcgcaccaccctgagctcaaagacgtatgggagaagctgcgggacggcgtcgcggtcatc
aagccggagcaggccgagcagccggcggggctcaacatcaagttgctgccgttccagcgc
gagggcctcgactggctcaagcggcaggaggcgggcccctggaagggaggcatgctggcc
gatgagatgggcatgggcaagacgatccagatgattagcctgatgctgagcgaccgccag
aagccgtgcctggtgctggcgccgacggtggctatcatgcagtggcgcaacgagatcgag
cagtacaccgagccgcggctcaaagtggagctgtggcacggcgccaaccgcacccaggac
gccgaccggctgcgacgcgccgacgtggtgctgacgagctatgcggtgctcgagagctgc
taccgcaagcaagagacgggtttccagcgcaaaaagatgcgtgtcaaggaggattcagtg
cttcatgccatccactggcgccgcatcatcctcgacgaggcgcacaacatcaaagagcgc
gccaccaacacggccaagggcgccttcgcgctcaagggcgacttccgctggtgcctcagc
ggcacgccgctgcagaaccgcgtgggggagctctactcaatgatccgcttcctcggcggc
gacccgtacgccttctacttctgcaaaaagtgcccgtgcaagtcgctccactggcagttc
agcgaccgccgcaactgcgacagctgcggtcacacgcccatgcaccacacgtgtttctgg
aacaacgagatcctcaagcccatccagaagaacggcgctgagcagggcgagggcaaggac
gctttcggccgcctccgcctgctgctcgagcgcatgatgctgcgtcgcaccaagctcgag
cgcgccgacgacatgggcctgccgccccgcaccatcgaggtgcgccgcgacctgttcaat
gaggaggaggaggacctgtacacgtccctctactcggacacaacgcgcaagttctcgacc
tacctcgaccagggcaccgtgctcaacaactacagcaacatctttacgctcctgacgcgg
atgcgccagatcgccaaccaccctgacctggtgctccgctcgcagtcgggcgtctcgaac
cgtctgttgggcgaacagcaggacgagcaccacgtgtgcaagatctgcgccgacgtggcc
gaggacgccatcatgtcgcgctgccgccacgtcttctgccgcgagtgcgtgcgccagtac
ctcgagaccgaccttccgcccgacgcgggcgcgcccgactgcccctactgccacgccacg
ctctcgatcgacctcgagggggaggctctcgagccgccgcagccgctcaacaatgcctcg
gacggcggccgcagcggccgacagggcatcctgtcgcgcctcgacatggaccagtggcgc
tccagcaccaagatcgaggcgctcgtcgaggagctgacgcagctgcgcgccgaggacaag
acgatcaagtcgctcgtcttttcccagtttgtcaacttcctcgacctgatcgccttccgc
ctccagcgcgccggcttccagatctgccggctcgagggcaacatgtcgcccgaggcgcgc
aacaagacgatcaagcacttcatggagaaccccaacgtcaccgtctttctcgtcagcctc
aaggccggcggtgtggccctcaacctaaccgaggcgtcgcgcgtctacctcatggacccg
tggtggaatccctcggtcgaggtgcaggccatggaccgcatccaccgactgggccagcat
cgacccatcatcgtcaagcgcatgatcatcgaaaacagcatcgagagccgcatcattgag
ctgcagaacaagaagagcgccatgatcgaggccgccatcggcaaggacgagtcagccatg
ggccgcctcagcgtcgccgatctccgcttcctctttacgctctga
DBGET
integrated database retrieval system
