Propionibacterium freudenreichii subsp. freudenreichii DSM 20271: RM25_0112
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Entry
RM25_0112 CDS
T03860
Name
(GenBank) Putative cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
pfre
Propionibacterium freudenreichii subsp. freudenreichii DSM 20271
Pathway
pfre00270
Cysteine and methionine metabolism
pfre00450
Selenocompound metabolism
pfre01100
Metabolic pathways
pfre01110
Biosynthesis of secondary metabolites
pfre01230
Biosynthesis of amino acids
Module
pfre_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
pfre00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RM25_0112
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RM25_0112
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pfre01007
]
RM25_0112
Enzymes [BR:
pfre01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
RM25_0112
Amino acid related enzymes [BR:
pfre01007
]
Aminotransferase (transaminase)
Class II
RM25_0112
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AJQ89847
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Position
137987..139192
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AA seq
401 aa
AA seq
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MGSQMDLQDFVEQYAVERKGTDSLKWDALGQRFGNAGLLPMWVADMEFKAPEAVIEALRT
RVSHGAFGYTYVDDAYFEAFDDWAARHNEARVQRDWVRFSTGVVSSFYWMVNAFTQPGDA
VLLATPVYYPMHNAVKDTGRKLVTTALQPDERGIYRYDMADMEQVITENSVKLFIMCSPH
NPVGRVWTPEELVDVLELCRSHGVLVVSDEIHQDIILGERPFVAAQQVQDGAFTDNLITL
NAASKTFNLAGLVHSHIIIPDKDLRARYDAWAKGYVQTETNIMGITATEAAWRHGQDWLD
GLLAVVRRNEAEFRRRIGEVAPKAAIPPLEGTYLLWLDLREYVDRREVKKFIQDQCNLAV
DYGEWFSPASRGFVRFNLATTPQIADEAISQLVEGLGTLDE
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggggtcacagatggatctgcaggatttcgtcgagcagtacgccgtcgagcgcaagggc
accgattcactcaaatgggacgccctgggccagcgcttcggcaatgccggcctgttgccc
atgtgggtggccgacatggagttcaaggcccccgaggcggtgatcgaggcgctgcggacg
cgcgtctcccacggtgcattcggctacacctatgtggacgatgcgtacttcgaggccttc
gacgactgggcggcgcggcacaatgaggcccgcgtgcagcgtgactgggtgcgcttctcc
accggcgtggtgtccagcttctactggatggtcaatgccttcacccagcccggcgatgcg
gtgctgctggcgacgccggtgtactacccgatgcacaatgccgtgaaggacaccggacgc
aagctggtgaccacggcgttgcagcccgacgagcgcggcatctaccgctacgacatggcc
gacatggagcaggtgatcaccgagaattcggtgaagctgttcatcatgtgctcgccgcac
aatccggtggggcgcgtgtggacgcccgaagagctggtcgacgtgctggagctgtgccgc
agccatggcgtgctggtcgtgtccgatgagatccaccaggacatcatcctgggcgaacgt
ccgttcgtggcggcccagcaggtacaggacggcgcgttcaccgacaacctgatcacgctg
aatgcggcgtccaagacgttcaacctggccgggctggtgcactcgcacatcatcatcccc
gacaaggacctgcgcgcccgctatgacgcgtgggcgaagggatatgtgcagaccgagacc
aacatcatgggcatcaccgccaccgaggccgcgtggcgccatggccaggattggctcgac
gggctgctggcggtggtgcgtcgcaacgaggccgagttccgccgccgcatcggtgaggtg
gcgccgaaggccgcgatcccgccgttggagggcacctacctgctgtggctcgacctgcgt
gagtatgtcgaccgtcgcgaggtgaagaagttcatccaggaccagtgcaatcttgccgtt
gactacggggaatggttcagcccggcgtcgcggggcttcgtgcggttcaacctggcgacc
accccgcagattgccgacgaggcgatcagccagctggtggagggcctcggcacgctcgac
gagtga
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