Pseudomonas fluorescens SBW25: PFLU_1159
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Entry
PFLU_1159 CDS
T00899
Symbol
nth
Name
(GenBank) Endonuclease III (EC (DNA-(apurinic or apyrimidinic site) lyase)
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFLU_1159 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfs03400
]
PFLU_1159 (nth)
Enzymes [BR:
pfs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PFLU_1159 (nth)
DNA repair and recombination proteins [BR:
pfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PFLU_1159 (nth)
Prokaryotic type
PFLU_1159 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
DUF2400
HHH_8
Motif
Other DBs
NCBI-ProteinID:
CAI2795461
UniProt:
C3KBZ5
LinkDB
All DBs
Position
1:complement(1293734..1294372)
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AA seq
212 aa
AA seq
DB search
MNAAKRLEIFRRLHEDNPEPKTELAYTSPFELLIAVILSAQSTDVGVNKATAKLYPVANT
PEAIYALGVDGLSEYIKTIGLYNSKAKNVIETCRLLVELHGSEVPQTREALEALPGVGRK
TANVVLNTAFRQLTMAVDTHIFRVSNRTGIARGKNVVEVEKQLMKFVPKPYLLDSHHWLI
LHGRYVCQARKPRCGSCRIEDLCEYKDKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgcaaaacgcttggaaattttccgcaggcttcacgaagacaatccggaaccc
aagaccgaactggcttacacctcgcccttcgaattgctgattgcggtgatcctgtcggca
caatccaccgacgtgggcgtcaacaaggccacagccaagctctatcccgtggcgaacacg
ccggaggcaatctatgccctgggtgtggacgggttgtcggaatacatcaaaaccatcggc
ctgtacaacagcaaggccaagaacgtcatcgaaacctgtcgcctgctggtggaactgcac
ggcagtgaagtgccacaaacccgcgaagccctggaagccctgccaggcgttggccgtaaa
actgccaacgtggtgctcaacaccgctttccgtcaactgacgatggcggtggacacccac
attttccgggtcagtaaccgaaccggcattgcccgtgggaaaaacgtggtggaggtggaa
aagcagttgatgaaattcgtgcccaagccgtatttgctcgattcccaccactggctgatc
cttcatggacgctatgtttgccaggcccgcaagccgcgttgcggcagctgtcggatagaa
gacctgtgcgaatacaaggacaagacatccgacgattga
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