Pseudomonas fluorescens SBW25: PFLU_3504
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Entry
PFLU_3504 CDS
T00899
Name
(GenBank) Glutamate dehydrogenase (EC
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs00220
Arginine biosynthesis
pfs00250
Alanine, aspartate and glutamate metabolism
pfs00430
Taurine and hypotaurine metabolism
pfs00910
Nitrogen metabolism
pfs01100
Metabolic pathways
pfs01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
PFLU_3504
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PFLU_3504
00220 Arginine biosynthesis
PFLU_3504
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
PFLU_3504
Enzymes [BR:
pfs01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
PFLU_3504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
ELFV_dehydrog
PAS_3
Motif
Other DBs
NCBI-ProteinID:
CAI2797712
UniProt:
C3KD82
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All DBs
Position
1:complement(3874931..3879790)
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AA seq
1619 aa
AA seq
DB search
MAFFTAASKADFQHQLQAALAQHISEQALPQVALFAEQFFGIISLDELTQRRLSDLAGCT
LSAWRLLERFDHTQPQVRVYNPDYERHGWQSTHTAVEVLHHDLPFLVDSVRTELNRRGYS
IHTLQTTVLSVRRGAKGELLEILPKGTQGDGVQQESLMYLEIDRCANAAELNVLSKELEQ
VLGEVRVAVADFEPMKAKVQDLLAGIDASPFSIDGEEKAEIKNFLEWLVGNHFTFLGYEE
FVVRDEADGGHIEYDADSFLGLTKLLRAGLTADDLRIEDYAVAYLREPTVLSFAKAAHPS
RVHRPAYPDYVSIREISADGKVIKEHRFMGLYTSSVYGESVRVIPYIRRKVAEIERRSGF
QPKAHLGKELAQVVEVLPRDDLFQTPVDELFSTVMSIVQIQERNKIRVFLRKDPYGRFCY
CLAYVPRDIYSTEVRQKIQQVLMDRLKASDCEFWTFFSESVLARVQLILRVDPKNRLDID
PLQLEKEVVQACRSWQDDYSNLVVESFGEAHGTNVLADFPKGFPAGYRERFAAHSAVVDM
QHLLSLTEANPLVMSFYQPLGQVSGQRELHCKLYHADTPLALSDVLPILENLGLRVLGEF
PYRLRHANGREFWIHDFAFIAAEGVNLDIQQLNDTLQDAFVHIVHGDAENDAFNRLVLTA
GLPWRDVALLRAYARYLKQIRLGFDLGYIASTLNNHTDIARELTRLFKTRFYLARKLTAE
DLEDKQQRLEQAILTALDDVQVLNEDRILRRYLDLIKATLRTNFYQTDANGQNKSYFSFK
FNPHAIPELPKPVPKFEIFVYSPRVEGVHLRFGNVARGGLRWSDREEDFRTEVLGLVKAQ
QVKNSVIVPVGAKGGFLPRRLPLGGSRDEIAAEGIACYRIFISGLLDITDNLKDGALVPP
ANVVRHDGDDPYLVVAADKGTATFSDIANGIAIDYGFWLGDAFASGGSAGYDHKKMGITA
KGAWVGVQRHFRERGINVQEDSITVVGVGDMAGDVFGNGLLMSDKLQLVAAFNHLHIFID
PNPNPATSFVERQRMFELPRSAWTDYDTSIMSEGGGIFSRSAKSIAISPQMKERFDISAD
KLTPTELLNALLKAPVDLLWNGGIGTYVKASTESHADVGDKANDALRVNGNELRCKVVGE
GGNLGMTQLGRVEFGLNGGGSNTDFIDNAGGVDCSDHEVNIKILLNEVVQAGDMTDKQRN
QLLASMTDEVGHLVLGNNYKQTQALSLAARRAYERAAEYKRLMSDLEGRGKLDRAIEYLP
TEEQLVERAANGKGLTRPELSVLISYSKIDLKEALLKSLVPDDEYLTRDMETAFPPSLVA
KFSEAMRRHRLKREIVSTQIANDLVNHMGITFVQRLKESTGMSPANVAGAYVIVRDIFHL
PHWFRQIEALDHQVSADVQLQLMDELMRLGRRATRWFLRSRRNEQDAGRDTAHFGPHLAA
LGLKLDELLEGPTREGWQNRYQAYTEAGVPELLARMVAGTTHLYTLLPIIEAADVTGHDA
AEVAKAYFAVGSALDLPWYLQQISDLPVANNWQAQAREAFRDDVDWQQRAITISVLQMAD
APEDMEARVALWLEQHKDMADRWVAMMVEIRAAVGTDYAMYAVANRELLDLALSGQSVL
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcttcaccgcagccagcaaggccgacttccagcatcaactgcaagcggcactg
gcgcagcacatcagtgaacaggcactgccacaagtggcgctgttcgctgagcaattcttc
ggcattatttccctggacgaactgacccagcgtcgcctttccgacctggccggttgcacc
ctgtctgcctggcgcctgcttgagcgctttgaccacacccaaccgcaagtgcgggtctac
aaccccgattacgaacgtcatggctggcagtcgacccacaccgcggtcgaagtgctgcac
catgacctgccattcctggtggactcggtacgtaccgagctgaaccgccgtggctacagc
atccacaccctgcagaccaccgtgctcagcgtacgccgtggcgccaagggcgagttgctg
gaaatcctgcccaaaggcacccagggcgacggtgtccagcaagaatcgctgatgtacctg
gaaatcgaccgttgcgccaatgccgccgaactgaacgtgctgagcaaagagcttgagcag
gtactgggcgaagtgcgcgtggccgtggccgacttcgaaccgatgaaagccaaggtccag
gacctgctggccggtattgacgccagcccgttcagcatcgacggcgaagaaaaagccgag
atcaagaacttcctggaatggctggtgggcaaccacttcaccttcctcggctatgaagaa
ttcgtggtacgtgacgaggcggatggcggtcatatcgaatatgacgccgattccttcctc
ggtctgaccaagctgctgcgcgccggtctcaccgccgacgacctgcgcatcgaagactac
gccgtggcctacctgcgtgagccgaccgtgctgtcgttcgccaaggccgcgcacccaagc
cgtgtacaccgtccggcgtatccggactacgtgtcgatccgtgagatcagcgccgacggc
aaggtcatcaaggaacaccgtttcatgggcctgtacacctcgtcggtgtatggcgaaagc
gtgcgggtcattccgtatatccgtcgcaaggtcgcggaaatcgaacgccgttccggcttc
caacccaaggctcacctgggtaaggaactggctcaggtcgtggaagtgctgccgcgtgac
gacctgttccagaccccggtcgacgagctgttcagcaccgtgatgtcgatcgtgcagatc
caggagcgcaacaagatccgcgtgttcctgcgcaaagacccgtacggtcgtttctgctac
tgcctggcctacgtgccgcgcgacatctattccaccgaagtgcgccagaagatccagcaa
gtgctgatggatcgcctgaaggcctcggactgcgaattctggaccttcttctccgaatcc
gtgctggcccgtgtgcagctgattctgcgggtagacccgaagaaccgcctggacatcgac
ccgctgcaactggaaaaagaagtggtgcaggcctgccgcagctggcaggacgactactcc
aacctggtcgtggaaagctttggcgaagcgcacggcaccaacgtgctggccgacttcccg
aaaggcttcccggcgggctaccgcgagcgttttgccgcgcattcggctgtggtcgacatg
cagcatttgctcagcctgaccgaagccaacccgctggtcatgagcttctaccagccgctg
ggccaggtttccggccagcgcgagctgcattgcaagctctaccatgcggacaccccgctg
gcgctgtccgacgtgttgccgatcctggaaaacctcggcctgcgcgtgctgggcgaattc
ccgtaccgcctgcgtcacgccaatggtcgtgagttctggatccatgattttgcgttcatt
gccgccgaaggcgtgaacctggatatccagcagcttaacgacaccctgcaagacgcgttc
gtgcacatcgtgcatggcgacgccgagaacgatgcgttcaaccgcctggtactcaccgcc
ggcctgccatggcgcgacgtcgcgctgctgcgtgcctacgcccgttacctgaagcagatc
cgcctgggcttcgacctgggttacatcgccagcaccctgaacaaccacaccgacatcgcc
cgcgagttgacccggttgttcaagacccgcttctatctggcgcgcaagctcaccgccgaa
gacctggaagacaagcagcaacgcctggagcaagcgatcctcaccgccctggacgatgtt
caggtgctcaacgaagaccgcatcctgcgtcgctacctggacctgatcaaggccaccctg
cgcaccaacttctaccaaaccgacgccaacggccagaacaagtcgtacttcagcttcaag
ttcaacccgcacgcgattcctgagctgcctaagccagtgccgaagtttgaaatcttcgtg
tactcgccacgcgtcgaaggcgtgcacctgcgctttggcaacgtcgcgcgcggcggcctg
cgttggtccgaccgtgaagaagacttccgcaccgaagtgcttggcctggtaaaagcccag
caagtgaagaactcggtgatcgtgcctgtgggcgcgaagggcggcttcctgccgcgtcgc
ctgccattgggcggcagccgggacgagatcgcggccgagggcatcgcctgctaccgcatc
ttcatttccgggctgttggacatcaccgacaacctgaaggacggcgccctggtgccgccg
gccaacgtcgtgcgtcatgacggcgatgacccgtacctggtcgtggcagcggacaaaggc
acggcaaccttttccgacatcgccaacggtatcgccatcgactacggcttctggctgggt
gatgcgttcgcttccggtggttccgccggttacgaccacaagaaaatgggcatcaccgcc
aaaggcgcgtgggtcggtgtgcagcgtcacttccgtgagcgcggcatcaatgtgcaggaa
gacagcatcacggtcgtgggcgtcggcgacatggccggcgacgtgttcggtaacggcctg
ttgatgtccgacaagctgcaactggtcgcggccttcaaccacttgcatatattcatcgat
ccaaacccgaacccggcgaccagcttcgtcgagcgtcagcgcatgttcgagctgccgcgt
tcggcctggaccgactacgacaccagcatcatgtccgaaggcggcggtatcttctcgcgc
agcgcgaagagcattgccatctcgccacagatgaaagaacgcttcgacatctcggccgac
aagctgaccccgaccgaactgctgaacgccttgctcaaggcgccggtggacctgttgtgg
aacggcggtatcggtacctacgtcaaggccagcaccgaaagccacgccgatgtcggcgac
aaggccaacgatgcgctgcgcgtgaacggtaacgagctgcgctgcaaggtggtgggcgag
ggcggtaacctgggcatgacccagctgggtcgtgtggagttcggcctcaatggcggcggt
tccaacaccgacttcatcgacaacgccggtggcgtggactgctccgaccacgaagtgaac
atcaagatcctgctcaacgaagtggtgcaggccggtgacatgaccgacaagcagcgcaac
cagttgctggcgagcatgaccgacgaagtcggccacctggtgttgggcaacaactacaag
cagacccaggccctgtccctggcagcgcgccgtgcctacgagcgtgccgccgagtacaag
cgcctgatgagcgacctggaaggccgtggcaagctggaccgcgccatcgagtacctgccg
accgaggagcagcttgtggagcgcgccgcgaacggcaagggcctgacccgtccggagctg
tcggtgctgatctcgtacagcaagatcgacctcaaggaagcgctgctcaagtcgctggtg
ccggatgacgagtacctgacccgtgacatggagaccgcgttcccaccgagcctggtggcc
aagttctccgaggccatgcgtcgtcaccgcctcaagcgcgagatcgtcagcacccagatc
gccaacgacctggtcaaccacatgggcatcaccttcgttcaacgactcaaagagtcgacc
ggcatgagcccggcgaacgtggcgggcgcttatgtgatcgtgcgtgacatcttccatctc
ccgcactggttccgtcagatcgaagcgctggaccaccaggtctccgctgacgtgcaattg
cagttgatggacgaactgatgcgcctgggccgccgcgctacgcgctggttcctgcgcagc
cgtcgcaacgagcaggacgctggccgtgacaccgcgcacttcggtccgcacctggccgcg
ttgggcctcaagctcgacgaactgctggaaggcccgacccgcgaaggttggcagaaccgc
taccaggcctacaccgaagcgggcgtgcctgagctgttggcgcgcatggttgcaggcact
acccacctgtacaccttgctgccgatcatcgaagccgccgacgtcaccgggcacgacgcc
gccgaagtggccaaggcctacttcgccgtcggcagcgccctggacctgccgtggtacctg
cagcagatcagcgatctgccggtggccaacaactggcaggcccaggcccgcgaagcgttc
cgcgatgatgtggactggcagcaacgcgcgattaccatctccgtcctgcaaatggccgac
gcgccagaagacatggaagcccgcgtggccctgtggcttgagcagcacaaggacatggcc
gatcgttgggtcgcgatgatggtggagatccgtgctgcggtcggcacggactacgccatg
tatgcggtggccaaccgtgagctgctggacctggcgttgagcggtcagtcggtgctgtaa
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