Pseudomonas fluorescens SBW25: PFLU_4588 Help Entry PFLU_4588         CDS       T00899                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pfs  Pseudomonas fluorescens SBW25 Pathway pfs03030   DNA replication pfs03410   Base excision repair pfs03420   Nucleotide excision repair pfs03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pfs00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     PFLU_4588    03410 Base excision repair     PFLU_4588    03420 Nucleotide excision repair     PFLU_4588    03430 Mismatch repair     PFLU_4588  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pfs03032]     PFLU_4588    03400 DNA repair and recombination proteins [BR:pfs03400]     PFLU_4588 Enzymes [BR:pfs01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      PFLU_4588 DNA replication proteins [BR:pfs03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      PFLU_4588 DNA repair and recombination proteins [BR:pfs03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      PFLU_4588    NER (nucleotide excision repair)     GGR (global genome repair) factors      PFLU_4588    MMR (mismatch excision repair)     DNA ligase      PFLU_4588   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       PFLU_4588 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT Nlig-Ia DNA_ligase_ZBD 5_3_exonuc Tla3_C PTCB-BRCT DUF4796_N Motif Other DBs NCBI-ProteinID:  CAI2798756 UniProt:  A0AA35N1A7 LinkDB All DBs Position 1:complement(5053376..5055733) Genome browser AA seq 785 aa AA seqDB search MTAAHTRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEAEHPDLVTRDSPTQ RVGSAALSAFTQVKHDIPMLSLGNAFDETTMLEFDRRVTEGLDLPVGDLFGGGAAVEYSC EPKLDGLAVSLLYQDGELVRGATRGDGTTGEDISVNIRTVRNIPLKLHGSGWPATLEVRG EVFMSKAGFERLNASQLEVGGKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGVTTDIS DTHIGNLQQLKKWGMPISHELKLAKGIQDCLDYYRDIGERRNSLPYEIDGVVFKVNSIAS QRELGFRAREPRWAIAHKFPAMEELTELLDVEFQVGRTGAVTPVARLKPVKVAGVTVSNA TLHNMDEVARLGLMIGDTVIIRRAGDVIPQVVSVVPERRPENARAVQIPESCPVCGSHVE RTQLVKRSKGKETVSEGAVYRCVGRLACGAQLKQAIIHFVSRRAMDIDGLGDKTIEQLVD EKLIGSPADLYTLKYEQIIDLEGFADISSKKLITAIENSKTPTLARFIYALGIPDVGEET AKVLARSLASLERVQKALPEVLTYLPDVGLEVAHEIHSFFEDSHNQDVIGALLSPQACGL QLQDQGELSAEFAASTTLGGLLDKLHVPSVGPGAAQKLADKFVTLEGVIKADWLDMRQAL PEKQAKAVREFFDNADNANHALAIEQQLKDFGMHWDSEKKVVEGLPEAGHTWVLTGSLEL MSRDVAKDKLESLGAKVAGSVSAKTHCVVAGPGAGSKLAKASELGLKVLDEEAFVAFLAK HNIPV NT seq 2358 nt NT seq  +upstreamnt  +downstreamnt atgaccgccgcccacacccgcatcctcgaactgcgcgctgaactggatcagcacaactac cgttaccacgtccttgacgagccgagcattccggacgccgagtacgaccggctgttccac gagctcaaggccctggaggccgagcacccggacctggtcacgcgtgattcaccgacgcag cgggtcggcagtgcggcgttgtcggcgttcacccaggtcaagcacgacattccgatgctc agcctcggcaatgccttcgatgaaaccactatgctcgaatttgatcgccgggtgaccgaa gggctcgacctgccggtgggcgatctgtttggcggcggggcagcggtggagtacagctgc gaaccgaagctcgatggcctggcggtcagcctgctgtatcaggacggcgagctggtacgc ggcgccacccgtggcgacggcaccaccggcgaagacatcagcgtcaacatacgcaccgtg cgcaatattccgttgaagctgcacggcagcggctggccggcgaccctggaagtgcggggt gaagtgttcatgtccaaggccggtttcgaacggctcaatgcctcgcaactggaagtcggc ggcaagaccttcgccaacccgcgtaacgccgctgccggtagcctgcgccagctggactcg aagatcactgccagccgcccgttggaattctgctgctacggtgtgaccaccgacatcagt gatacccatatcggcaacctgcaacaactgaagaagtggggcatgccgatcagccacgag ctgaaactggccaagggtatccaggattgtctggattactaccgcgacatcggcgagcgg cgtaacagcctgccgtatgaaatcgacggtgtcgtattcaaggtcaacagcatcgcctct cagcgcgagttggggttccgcgcccgcgaaccgcgctgggccatcgcgcataaattcccg gccatggaagaactgaccgaactgctcgacgtggaattccaggtcggtcgtaccggcgcc gtcacgccggtcgcgcgacttaaaccagtcaaggtcgcgggtgtgaccgtgtccaacgcc acgttgcacaacatggatgaagtcgcgcgcctgggcctgatgatcggcgacaccgtgatc atccgccgcgccggtgatgtgatcccgcaggtcgtgtcggtcgtccccgagcgccgcccg gaaaatgcccgcgcggtgcagatccccgaaagctgcccggtgtgtggctcccatgtggag cgcacgcaactggtcaagcgcagcaagggcaaggaaaccgtcagcgaaggcgcggtgtac cgttgcgtcggccgtctggcctgtggcgcccagcttaagcaggcgattatccatttcgtt tcgcgccgcgccatggacatcgacggcctgggcgacaagaccatcgagcaactggtggat gaaaagcttatcggctcgccggccgacctctacacgctcaagtacgagcagatcatcgac ctggaaggctttgccgatatttccagcaaaaagctgatcaccgccatcgaaaacagcaag accccgaccctggcgcggtttatctacgccttgggcattcccgacgtaggcgaggaaacc gccaaggtgctggcgcgctccctggcgtctctggagcgcgtgcaaaaagccttgccggaa gtgctgacgtacctgccggacgtgggcctggaagtggcgcacgagattcacagcttcttc gaagacagccacaaccaggacgtgatcggcgcgctgctgtcgccgcaggcatgcggcctg caattgcaagatcagggcgaactgagcgccgaattcgccgccagcaccaccttgggtggt ttgctcgacaagctccacgtgcccagcgtcggccctggcgctgcgcagaagctggcggac aagttcgttaccctggaaggcgtgatcaaggccgactggctggatatgcgtcaggcactg cccgagaagcaggccaaggctgtgcgcgaattcttcgataacgcagacaacgccaaccac gccctggccatcgagcagcagctcaaggattttggcatgcattgggacagcgagaagaag gtagtcgaaggcttgcccgaggccgggcatacctgggtgctcaccggctcgctggagctg atgagccgtgacgtggccaaggataaacttgaaagcctgggcgccaaggtggcgggttcg gtctcggcgaaaacccactgcgtggtggcggggccgggtgccggttccaagctggccaag gccagtgaattgggcctgaaggtgttggatgaagaagctttcgtcgccttcctcgccaaa cacaacatccccgtctga

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