KEGG   Pseudomonas fragi: AV641_05105
Entry
AV641_05105       CDS       T04285                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
pfz  Pseudomonas fragi
Pathway
pfz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pfz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AV641_05105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfz03400]
    AV641_05105
Enzymes [BR:pfz01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AV641_05105
DNA repair and recombination proteins [BR:pfz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AV641_05105
 Prokaryotic type
     AV641_05105
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH Ogg-HhH HHH_5 HHH_8
Other DBs
NCBI-ProteinID: AMB78488
LinkDB
Position
complement(1100603..1101241)
AA seq 212 aa
MNAAKRLEIFRRFHEDNPEPKTELAYTSPFELLIAVILSAQATDVSVNKAMAKLFPVANT
PEAIYALGVEGLSQYIKTIGLYNSKAKNVIETCRLLIERHAGQVPQTREELEALPGVGRK
TANVVLNTAFRQLTMAVDTHIFRVSNRTGIAPGKNVVEVEKQLMKFVPKPYLLDAHHWLI
LHGRYVCQARKPRCGSCRIEDLCEFKQKTSDD
NT seq 639 nt   +upstreamnt  +downstreamnt
atgaacgccgcaaagcgccttgaaatatttcgccggtttcacgaagacaatcccgagccc
aaaaccgaactggcctacacgtctcccttcgaattattgattgccgttatcttgtctgcg
caagccaccgacgtaagcgtgaacaaggcaatggccaaattgtttccagtcgcaaatacc
ccagaagccatctacgctctgggagtggaagggctgtcgcagtacatcaaaaccatcggc
ctgtataacagcaaggccaagaacgttatcgaaacctgtcgtttactgattgaacggcat
gccggccaggttccacaaacccgcgaggagcttgaagcgcttcccggtgtaggtcgtaaa
acagcaaacgtcgtgcttaacaccgccttcagacagctgaccatggccgtagatacccat
attttcagggtcagtaaccgaaccggtattgcaccaggcaaaaatgtggtcgaggttgaa
aagcaattaatgaaattcgtacccaagccttatctgctcgacgcccaccactggctcatc
ctgcatggtcgttacgtttgccaggcgcgcaagccgcgctgcgggagctgccgcatagaa
gacctgtgtgaattcaagcaaaagacctctgacgattga

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