Pseudomonas fragi: AV641_07760
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Entry
AV641_07760 CDS
T04285
Name
(GenBank) 2-oxoglutarate dehydrogenase subunit E1
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pfz
Pseudomonas fragi
Pathway
pfz00020
Citrate cycle (TCA cycle)
pfz00785
Lipoic acid metabolism
pfz01100
Metabolic pathways
pfz01110
Biosynthesis of secondary metabolites
pfz01120
Microbial metabolism in diverse environments
pfz01200
Carbon metabolism
pfz01210
2-Oxocarboxylic acid metabolism
Module
pfz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AV641_07760
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AV641_07760
Enzymes [BR:
pfz01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
AV641_07760
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AMB78970
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All DBs
Position
1652856..1655687
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AA seq
943 aa
AA seq
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MQESVMQRMWNSGYLSGGNAAYVEELYELYLHDPNAVPEEWRTYFQTLPNDGNSANDVSH
STIRDHFVLLAKNQRRAQPVSAGSVSSEHEKKQVEVLRLIQAYRMRGHQAAQLDPLGLWQ
RPAPADLSINHYGLTNADLDTTFRAGDLYIGKEEASLREILEALQQTYCRTIGAEFTHIV
DSEQRHWFEQRLESVRGRPTYSAEIKGHLLERVTAAEGLEKYLGTKYPGTKRFGLEGGES
LIPLLDELIQRSGNYGTKEIVIGMAHRGRLNVLVNTFGKNPRDLFDEFEGKKKIELGSGD
VKYHQGFSSNVMTSGGEVHLAMAFNPSHLEIVSPVVEGSVRARQDRRNDKTGEKVLPISI
HGDAAFAGQGVVMETFQMSQTRGFKTGGTVHLVINNQVGFTISNPEDSRSTEYCTDVAKM
IQAPILHVNGDDPEAVLFVTQLAIDYRMQFKRDVVIDLFCYRRRGHNEADEPNGTQPLMY
QQIAKQRTTRELYAERLTQENVVDAERVQSKIDEYRNALDNGLHVVKSLVKEPNKELFVD
WRPYLGHAWTARHDTRFDLKTLQELSAKLLEIPEGFVVQRQVSKIYEDRQKMQAGGLPIN
WGYAETMAYATLAFEGHPIRMTGQDIGRGTFSHRHAVLHNQKDAGTYIPLQHLYQGQPRF
DLYDSLLSEEAVLAFEYGYSTTTPDALVIWEAQFGDFANGAQVVIDQFITSGEHKWGRLC
GLTMLLPHGYEGQGPEHSSARLERYLQLCAEHNIQVCVPTTPAQIYHLLRRQVIRPLRKP
LIVLTPKSLLRHKLAVSTLEDLAEGSFQTVIPEIDAQDPAKVGRIVLCSGKVYYDLLEKR
RAEGRDDIAIVRLEQLYPFPEDDLIEVLAPYKNAKHIVWCQEEPMNQGAWYCSQHHMRRI
IGGHDKSLVLEYAGRDASAAPACGYASMHAEQQAKLLQDAFTV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagcgtgatgcagcgcatgtggaacagcggctatctttcaggtggtaacgct
gcctatgtggaagagctctatgagctctacctgcacgaccctaacgctgtgccagaagaa
tggcgcacctactttcagacgttgcccaatgacggcaactctgccaacgatgtttcgcac
tctacaatccgcgaccatttcgtgctgctggcaaagaaccagcgccgcgcccaaccggtt
tctgccgggagcgtgagcagtgagcatgagaagaagcaagttgaagtgctgcgattgatc
caggcctatcggatgcgcggccaccaggcagcccagcttgatccgctggggctgtggcag
cgtcctgcacctgcagacctgtcgatcaatcattacggcttgaccaatgccgatcttgat
acgaccttccgtgccggcgacctgtatatcggcaaagaggaagcgagcctacgcgaaatt
ctcgaagctttgcagcagacatattgccgcaccattggcgccgagttcacgcacatcgtc
gattccgagcagcgccactggtttgaacagcgcctcgaaagcgtacgtggccgtccaacc
tactcggcagagatcaagggccatttgcttgagcgcgtgactgctgctgaaggcctggaa
aagtacctgggcaccaagtacccgggcaccaagcgttttggcctggaaggcggcgagagc
ctgattcctttgctggacgagctgatccagcgttcgggcaactacggcaccaaagaaatc
gttatcggcatggcccaccgtggccgtctgaacgttctggtcaacaccttcggtaaaaac
ccgcgcgacctgttcgacgagtttgaaggcaagaagaaaatcgagctgggttccggtgac
gttaaataccaccagggcttctcctccaacgtcatgacctccggtggcgaagtccacctg
gcgatggcgttcaacccttcccacctggaaatcgtttctccagtggttgaaggttcggta
cgtgcacgccaggatcgtcgtaacgacaagaccggcgaaaaagtgctgccgatttccatc
cacggtgatgctgcattcgcaggtcagggcgtggtcatggaaaccttccagatgtcgcag
acccgcggcttcaagactggcggtacggttcacctggtgatcaacaaccaggttggcttc
accatcagcaaccctgaagactcgcgctctaccgagtactgcactgacgtcgcgaaaatg
atccaggcgccgatcctccatgtaaatggtgatgatccggaagccgtattgttcgtgacc
cagctggcaatcgactaccgcatgcagttcaagcgtgacgtcgtgatcgacctgttctgc
taccgccgtcgcggtcacaacgaggccgacgagccaaacggcactcagccgttgatgtat
cagcagatcgccaagcagcgcactacccgtgaactgtatgccgagcgtctgactcaggaa
aacgtggttgacgcagagcgcgttcagtccaagatcgacgaatatcgcaacgcgctggac
aacggtctgcatgttgtgaaaagtctggtcaaagagccgaacaaagagctgttcgttgac
tggcgtccgtacctgggccacgcctggactgcgcgtcacgacacgcgttttgatctgaaa
accctgcaagaactgtcggccaagctgctggaaatcccagaaggcttcgtggttcagcgt
caggtgtcgaagatctacgaagatcgtcaaaaaatgcaagccggcggcctgccgatcaac
tggggttatgccgaaaccatggcatacgcgaccctggcgttcgaaggtcacccgattcgc
atgaccggtcaggacatcggccgcggtacgttctcgcaccgtcacgccgtgttgcacaac
cagaaagatgctggcacctacatcccgctgcagcacctgtaccagggtcagccacgtttt
gacctgtacgactcgttgctgtctgaagaggctgtactggcgttcgaatacggttattcg
accaccacgccggatgctctggttatctgggaagcccagttcggcgatttcgccaacggc
gcccaggttgtaattgaccagttcatcaccagcggtgagcacaagtggggccgtctgtgc
ggtctgaccatgttgctgccacacggttacgaaggtcagggcccggagcactcctccgca
cgtcttgagcgttacctgcaattgtgtgccgagcacaacattcaggtgtgcgtaccaacg
actccagcgcagatttaccacctgctgcgccgtcaggttatccgtccgctgcgcaagccg
ctgatcgtcctgacacccaagtcgttgctgcgtcacaaattggcagtctcgaccctggaa
gatctggccgaaggttcgttccagaccgttattccggagatcgatgcacaggatccggcg
aaagtcggtcgcatcgtgctgtgtagcggcaaggtctactacgacctgttggaaaaacgc
cgtgccgaaggtcgtgatgacatcgccatcgtgcgtcttgagcagctgtacccgttccct
gaggacgacttgattgaagtcctggctccgtacaaaaacgccaaacacattgtctggtgt
caggaagagccgatgaaccagggtgcctggtactgcagccagcatcacatgcgccgcatc
attggcggtcacgataaatctctcgtacttgagtacgcgggccgtgacgcttctgctgca
cctgcttgtggttatgcatcgatgcacgccgagcaacaggcaaaactgttgcaagacgcg
tttactgtttaa
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