Pseudomonas fragi: AV641_10525
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Entry
AV641_10525 CDS
T04285
Name
(GenBank) 4-hydroxy-2-oxovalerate aldolase
KO
K18365
4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:
4.1.3.39
4.1.3.43
]
Organism
pfz
Pseudomonas fragi
Pathway
pfz00362
Benzoate degradation
pfz00621
Dioxin degradation
pfz00622
Xylene degradation
pfz00984
Steroid degradation
pfz01100
Metabolic pathways
pfz01120
Microbial metabolism in diverse environments
pfz01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AV641_10525
00622 Xylene degradation
AV641_10525
00621 Dioxin degradation
AV641_10525
00984 Steroid degradation
AV641_10525
Enzymes [BR:
pfz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
AV641_10525
4.1.3.43 4-hydroxy-2-oxohexanoate aldolase
AV641_10525
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GFIT
Motif
Pfam:
HMGL-like
DmpG_comm
CLP_protease
ThiG
Motif
Other DBs
NCBI-ProteinID:
AMB79467
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Position
complement(2314743..2315765)
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AA seq
340 aa
AA seq
DB search
MDLRGKKITVHDMCLRDGMHPKRHQISLQQMKDIACGLDAAGVPLIEVTHGDGLGGSSVN
YGFPAHTDEQYLSAVIPMMKQAKVSALLLPGIGTVDHLQMAYELGVNTIRVATHCTEADV
SEQHISYARKLGMDTVGFLMMAHMNSPEGLVKQGKLMESFGANCIYLTDSAGYMLPHDIK
ARVAAMRAALHPDTEIGFHGHHNLSMGVSNSIAAIEAGATRIDAAAAGLGAGAGNTPMEI
LVAVCDRMGIETGVSVFGIQDVAEDLVVPIMDFPIRSDRDALTMGYAGVYGSFLLFAKRA
EKKYGVPAREILVEMGRRGMVGGQEDMIEDTAMTLARRRG
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggatcttcgcggcaaaaaaatcaccgtgcatgacatgtgcctgcgcgacggcatgcac
cccaagcgtcaccagatctccctgcaacaaatgaaagacatcgcctgcggcctggatgct
gccggtgtgcctttgatcgaggtgacccacggcgatggcctgggcggcagttcggtgaac
tacggttttccggcgcataccgacgagcaatacctgtcggcggtaatcccgatgatgaag
caggccaaggtttcagccttgctgttgccgggtatcggaaccgtggatcacctgcaaatg
gcctacgagctgggggtcaacacgatccgggtcgccacccattgcaccgaggcagacgtc
tccgaacagcacatttcctatgcccgcaagctgggcatggacaccgtgggctttttgatg
atggcgcacatgaacagccccgaagggctggtcaagcaaggcaagctgatggagagcttc
ggggccaactgcatctacctcaccgactccgcaggctacatgctgccccatgacatcaag
gcccgggtagcggccatgcgggccgcgctgcacccggacaccgagatcggttttcacggc
catcacaacctgtcgatgggggtctccaactccatcgctgcaattgaagccggggctacc
cggatcgatgccgccgccgcaggtctgggcgccggcgcgggcaatacgccgatggaaatc
ctggtggcggtctgtgaccgcatgggcattgaaaccggagtcagcgtgtttggcatccag
gacgtggctgaagacctggtcgtgccgatcatggacttcccgatccgcagcgatcgcgac
gccctgaccatgggctatgccggtgtgtatggctcgttcctgctgttcgccaagcgcgcc
gagaagaagtacggcgtaccggcacgggaaattctggtggagatgggccgacgcggcatg
gtcggcggccaggaagacatgatcgaagataccgccatgaccctggctcgccgccggggc
tga
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