Phaeobacter inhibens DSM 17395: PGA1_c00860
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Entry
PGA1_c00860 CDS
T02192
Symbol
patB
Name
(GenBank) cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga00270
Cysteine and methionine metabolism
pga00450
Selenocompound metabolism
pga01100
Metabolic pathways
pga01110
Biosynthesis of secondary metabolites
pga01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
PGA1_c00860 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PGA1_c00860 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pga01007
]
PGA1_c00860 (patB)
Enzymes [BR:
pga01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
PGA1_c00860 (patB)
Amino acid related enzymes [BR:
pga01007
]
Aminotransferase (transaminase)
Class II
PGA1_c00860 (patB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
DUF3772
NIR_SIR_ferr
Motif
Other DBs
NCBI-ProteinID:
AFO89832
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All DBs
Position
complement(84883..86055)
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AA seq
390 aa
AA seq
DB search
MNFDKIIDRRNTHCIKWDMMEDLYNVPRDEGLSMWVADMDFAVPSVVTDKMREMADHGVY
GYVNCDSPYKSAICWWMQNRHGWSVDPEAIFTTTGLVNGVGMCLDTFTQQGDGIVLFTPV
YHAFAKVIRNAGREVVECELAVNDGRYEMDFSTYDAQMTGAEKMVILCSPHNPVGRVWTE
EELRGVADFAKRHDLILLSDEIHHDLVFDGATHIPMQNAAPDITDRLLMLTAPSKTFNFA
GMHTGQVIIPDPELRAKFSRRMMALALSPNSPGQWATAAAYSPEGAAWVDELVPYLDGNR
QLFDAAVNEIPGLHSTRLEATYLAWVDFSGTGMSREEFTARVEQGAKIAANHGPSFGTGG
ENFLRFNLGTQRARVEEACDRLRNAFSDLQ
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgacaagatcattgatcgccggaacacacattgcatcaagtgggacatgatg
gaggatctctacaacgtgccacgcgacgagggcctgtcgatgtgggttgcggatatggat
ttcgcagttccctcggtggtgaccgacaaaatgcgcgagatggcagaccacggggtctat
ggatatgtgaattgcgacagcccctataaatccgcaatctgctggtggatgcaaaaccgc
cacggatggtcggtcgatccggaggcgattttcaccacaacagggctggtcaatggtgtc
ggcatgtgtctcgacaccttcacccaacagggtgatgggatcgtattgttcacacccgtc
tatcacgcctttgccaaggtcatccgcaacgccgggcgtgaagtggttgaatgtgaactc
gccgtcaatgacggacggtatgagatggacttctccacttatgacgcgcagatgaccggc
gcggagaaaatggtcatcctctgctcgccgcataatccggttggccgagtatggaccgag
gaagagctgcgcggcgttgccgacttcgccaagcggcacgatctgatcctgctgtcggac
gaaatccatcacgatttggtcttcgacggcgctacccatatcccgatgcagaacgcagcc
ccggacatcaccgatcgtctgctcatgctgaccgccccgtccaaaacgttcaattttgcc
ggcatgcacaccggtcaggtcatcattccggacccagagctgcgggcgaaattttcccgc
cgaatgatggcgttggcgctatcgccgaattcccccggccaatgggctacggcggcggct
tattctcccgaaggtgccgcatgggtggatgagctggtgccctatctcgatggcaatcgc
cagctctttgatgctgcggtgaatgagatcccgggcctgcactccaccaggctggaggca
acctatctcgcctgggtcgatttctctggcaccggtatgagccgcgaggaatttacggcg
cgggtagaacagggcgccaagattgcagccaatcacggcccgagctttggcactggcggc
gaaaatttcctgcgcttcaacctcggcacccaacgcgcgcgggtggaagaggcctgcgat
cggctgcgcaacgccttctccgacctgcaatag
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