Phaeobacter inhibens DSM 17395: PGA1_c29040
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Entry
PGA1_c29040 CDS
T02192
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PGA1_c29040 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pga03400
]
PGA1_c29040 (nth)
Enzymes [BR:
pga01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PGA1_c29040 (nth)
DNA repair and recombination proteins [BR:
pga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PGA1_c29040 (nth)
Prokaryotic type
PGA1_c29040 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AFO92561
LinkDB
All DBs
Position
3044334..3044978
Genome browser
AA seq
214 aa
AA seq
DB search
MAKQLDYHTLREIFTRFQAADPEPKGELDHVNVYTLVVAVALSAQATDAGVNRATHALFQ
IADTPQKMLDLGEEGLIEHIKTIGLYRQKAKNVIKMSRILVEDYDGIVPNSRAALQSLPG
VGRKTANVVLNMWWRQPAQAVDTHIFRVGNRAGIAPGKDVDAVERAVEDNIPADFQLHAH
HWLILHGRYHCKARKPMCPTCIIRDLCQFEDKTL
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaactcgattatcacactctgcgtgagatcttcacgcggtttcaggcagcg
gatccagaacccaagggcgagctggatcacgtcaacgtctatacccttgtggtggcggtg
gcgctgtcggcgcaggctacggatgccggtgtcaaccgggccacccacgcgctgtttcag
atcgcggacaccccgcaaaagatgctggatctgggcgaagaaggcctgatcgagcatatc
aagaccattggcctataccgtcagaaggccaagaacgtgatcaagatgtcgcggattttg
gtcgaagactacgatggcattgtgcccaattcccgcgcggcgctgcaatccctgccgggt
gtcgggcgcaagacggcgaatgtggtgctgaacatgtggtggcgccagcccgcacaggcg
gtggacacccatatctttcgcgtcggcaaccgggcgggcattgcgccgggcaaggatgtc
gatgcggtcgaacgcgcggtcgaagacaacattccggcagattttcagctccatgcccat
cattggctgatcctgcacgggcgataccattgcaaagctcgcaagccgatgtgccccacc
tgcatcatccgcgatctctgccagtttgaggacaaaactctatga
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