Plasmodium gaboni: PGSY75_1434000
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Entry
PGSY75_1434000 CDS
T08136
Name
(RefSeq) putative CCR4-associated factor 16
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
pgab
Plasmodium gaboni
Pathway
pgab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PGSY75_1434000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgab03019
]
PGSY75_1434000
Messenger RNA biogenesis [BR:
pgab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PGSY75_1434000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_23
AAA_29
RsgA_GTPase
AAA_18
Arf
MMR_HSR1
Dynamin_N
DnaB_C
AAA_24
Zeta_toxin
ATP-synt_ab
FtsK_SpoIIIE
AAA_22
AAA_25
Motif
Other DBs
NCBI-GeneID:
29778630
NCBI-ProteinID:
XP_018639401
UniProt:
A0A151LAD7
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Position
14:complement(1216092..1217388)
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AA seq
257 aa
AA seq
DB search
MNQIVINNLNYNYYNGIQRTRIKALQNVTLCFERGMRILVCGKNGAGKSTLLSIIAGKKL
IMENEVLIFKKHAFHDTDISNKIGYVGEWWSEEYAMNISIKDFCFNYGYTKRYKNLLKLF
ELDENKIISSLSKGERKKVQIMVNIIVRKDIYIFDEATESLDLVSRKLLLEFLKKECIKY
NSIVIYSTHIFDHMDKWSTHVLYLSEGIVTFFSSIYNITSLENYSSLAEHICDHMVEEIK
KKEKVDKLDDLLLIDSD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaatagtaattaataatttaaattataattactataatggtatacaaagaaca
cgtattaaagccttacaaaatgtcaccttatgttttgaaagggggatgaggatattagta
tgtggaaaaaatggagcaggaaaaagtacattattgagtatcatagcaggaaaaaaacta
attatggaaaacgaagtactaatatttaagaaacatgcttttcacgatacagacatatct
aataaaattggttacgttggagaatggtggagtgaagagtatgctatgaatattagcata
aaagatttctgtttcaattatggatatactaaaagatacaagaatttattaaaattattc
gaactagatgaaaataaaattatatctagtctttctaaaggtgaaaggaaaaaggttcaa
atcatggttaatataattgtgagaaaagatatttatatatttgatgaagctactgaatcg
ctcgatttggtgtcaaggaaattattactagaatttttaaagaaagaatgcataaaatat
aatagcattgttatatactcaacgcatatttttgaccatatggataagtggtctactcac
gttctatatctttctgaaggaatagttacttttttttcaagcatttataatattacaagt
cttgagaattattcttccctggccgaacacatttgtgaccacatggtggaggaaattaaa
aaaaaggaaaaggtcgataaattggacgatctcctgttaattgattcagattaa
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