Pseudomyrmex gracilis (graceful twig ant): 109855243
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Entry
109855243 CDS
T05003
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109855243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgc03400
]
109855243
Enzymes [BR:
pgc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
109855243
DNA repair and recombination proteins [BR:
pgc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
109855243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
109855243
NCBI-ProteinID:
XP_020284848
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MSLDLNKLKKRVPLERSKKKTDRYDGLSEKELEKYMLEDYLEMNLDIVFVGINPSLMAAH
RGRYYAGPGNHFYKLLHESGLTPRCISFEEDYKLLQYGIGLTNIVTRPTRSAADLKRAEI
KEGTGIVEEKLKIYKPKIAVFNGKCIYEVFANLNSKSTFYFGLQPERIGETAIWVTPSSS
ARCAHFPRMVDKLHFYTALKKYLDFLKGEITDVDVEEFQFEGKCKQSVASTSKMWRRKTM
STFLHGGRVVNKNTLCLDTSEEDIAAVRTTGFLLESLNHESHNKNKDMTKNEETHRVQSE
NRTLFNKPAEKTETNTMKIENFATPDTITGDIIVETMNKEISDVDKNQDCSAISNNTLSQ
ESTIHCKKNRKCKSSRITPRIVDIRSTLKNKNKSESLDFISLIKQRLSQKTNDDDAIISA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttgatttgaacaagctgaagaaaagagtgccattagaacggtcgaagaaaaag
acagataggtatgatggattgtcagagaaagaactcgaaaagtatatgttggaagattat
ctggaaatgaatctggatatagtctttgtcggcattaatccaagtctgatggcagcacat
cgtggtagatattatgcaggtcccggtaatcacttctacaaactcctacatgaatctggc
ttgacaccgagatgcatcagttttgaagaagattacaagctcttgcaatatggtattggt
ttgacaaacattgtaacacgtccgaccagatccgccgcagacttgaagcgcgcagaaatc
aaagagggtacgggaatagttgaggaaaaactgaaaatatacaagcccaaaatcgcagtg
ttcaatggtaaatgcatatacgaagtatttgccaatctcaatagtaagtctacattttat
tttggattgcaacctgaacgcattggcgaaacggcaatctgggtaacgccgtcgtctagc
gcacgttgtgctcattttccgagaatggtcgacaaactgcacttttacacagcactgaag
aagtacttggattttctaaaaggtgaaattaccgatgtcgacgtggaggaatttcaattt
gaaggaaaatgcaagcagtctgtggctagcacttccaagatgtggcgccgaaaaactatg
tccacttttttgcatggaggtagagttgttaacaaaaatacactttgtctggatacgtca
gaggaagatatagctgcagttcgcacaacaggatttctcttagaatcattgaatcatgaa
agtcacaataaaaataaagatatgactaaaaatgaagaaacacacagagttcaaagtgaa
aatcggacattgtttaacaaacctgcagaaaaaactgagacgaacactatgaaaatagaa
aattttgcaactcctgatactattactggagatataattgttgaaacaatgaataaggaa
atttctgatgttgataaaaatcaggattgcagtgctataagtaataatacattaagtcaa
gaaagtacaatacattgtaaaaaaaatagaaaatgtaagtcttcacgaattactccgaga
atcgtagacattcggagcactttgaaaaacaaaaataaaagcgagtcgttagattttatc
agcttaattaaacaaaggttatctcaaaaaactaacgacgacgatgcaattatatctgct
taa
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