Pseudomyrmex gracilis (graceful twig ant): 109858107
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Entry
109858107 CDS
T05003
Name
(RefSeq) homeobox protein extradenticle isoform X1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109858107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgc03000
]
109858107
Transcription factors [BR:
pgc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
109858107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
DUF7260
HTH_3
GAIN
CENP-B_N
LZ3wCH
UCH
YdaS_toxin
RPA_C
Motif
Other DBs
NCBI-GeneID:
109858107
NCBI-ProteinID:
XP_020290614
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MDEAGRMLQHGGSGVGLMGGNQGQAAQNTAGYGSMGPVDGTAAQGPDQAVEARKQDIGEI
LQQIMNITDQSLDEAQARKHTLNCHRMKPALFSVLCEIKEKTVLSLRNTQEEEPPDPQLM
RLDNMLIAEGVAGPEKGGGAGAAASASAAAAAGPPGQPDNAIEHSDYRAKLAQIRQIYHQ
ELEKYEQACNEFTTHVMNLLREQSRTRPITPKEIERMVQIIHKKFSSIQMQLKQSTCEAV
MILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNW
FGNKRIRYKKNIGKAQEEANLYAAKKAAAAFAGASPYSMGGASQGTPTPMMSPAPPGGPQ
DMAGYSMGINGSDYGSQPYNDGSMGYDPMHQYTLTQSQSMSPSQGYESVAKKAKTESTVA
RNSSFESTSSSGNSPNL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggctggcaggatgctgcaacacggaggatcaggtgtgggtctcatgggtgga
aaccagggtcaagcggcccagaacacagccggttacggaagcatggggcccgtcgacggc
acggcggcccagggtcccgaccaagcggtcgaagccaggaaacaggacatcggcgagatt
ttgcagcagatcatgaacatcaccgaccagagcctggacgaggcgcaagcaaggaaacac
actctgaactgccacaggatgaagcccgccctgttctccgttctctgcgaaatcaaggag
aagacagtattatctctgagaaacacgcaagaagaagagccgccggatccacagttgatg
cgactggataatatgctgatagcggaaggcgtcgccggaccggagaaaggtggcggagcg
ggagcagccgcttcagcatccgcagcggcagcggcgggtccacccggacaaccggacaac
gcaatcgaacactcggactacagagccaaactcgcccagattaggcaaatttatcaccaa
gaactagaaaaatacgagcaggcctgcaacgaatttaccacccacgtgatgaacctgttg
agggaacagagtcgcaccaggccaatcacgccgaaggaaatcgaaagaatggtccagatt
attcacaagaagttctccagcattcagatgcagctcaaacagtccacatgcgaagccgtg
atgatcctcaggagtcgattcttggatgccaggcgtaagagaaggaatttcagcaaacaa
gcgtctgaaattctgaacgagtacttctattctcacctcagtaatccttatccgagcgag
gaggccaaggaggagctcgcgcgaaaatgtggaattactgtgagccaggtatccaattgg
ttcggcaataagaggatacgctacaagaaaaacatcggcaaagcgcaggaagaagccaac
ttgtacgcggccaaaaaggcagcagcagcttttgcaggagcatcgccgtacagcatgggc
ggtgccagccaaggcacaccgacgccgatgatgtcgccggcgcctcctggaggaccgcag
gacatggctggatacagtatgggaataaacggtagcgattacggctcgcagccgtataac
gacggctcaatgggatacgatcccatgcatcagtatacgcttacgcaatcacaaagcatg
agtccttctcagggttatgagtctgttgcaaagaaggcaaaaacagagagcactgtggct
cgaaactcgagtttcgaaagcacctcttcttccggaaattctccaaacttgtag
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