Pseudomyrmex gracilis (graceful twig ant): 109859080
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Entry
109859080 CDS
T05003
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109859080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgc03041
]
109859080
Spliceosome [BR:
pgc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
109859080
Complex C
U5 SnRNP specific factors
109859080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
Roc
MMR_HSR1
Ras
ABC_tran
Motif
Other DBs
NCBI-GeneID:
109859080
NCBI-ProteinID:
XP_020292550
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MDADLYDEFGNYIGPDLASESEDENEYGNVGDDAEDRERSDEEMEEDKDESREQTEQGSS
MTVVLHEDKRYYPSALEVYGPEVETLVQEEDAQPLDKPLIAPTKKAKFQIKQQQLPETTY
SIEFLADMMDAPHLIRNVVLLGHLHHGKTTLVDCLVQQTHPYLHSITDEKPLRYTDTLFT
EQQRGVSTKATPVTLLLQDVKSKSYLLNIFDTPGHVNFSDEATAAIRLSDGAILIVDAAE
GVMLNTERLLKHALQEKLALTVCINKIDRLVLELKLPPLDAYYKLRHIIEEINGLIAMYS
DTENPAFVSPAVGNVCFASSEYNVCFTLKSFAALYAKTYPDLNFNEFAKRLWGDIYFNSK
TRKFTKKPPHNTAQRSFIEFILEPLYKIFAQVVGDVDTTLPDVLDELGIRLTSEEMKMNI
RPLLRLVCTRFLGDMCGLVDMCVTHVPSPQAHASTKVQHVYTGPIDSPLAQDMVNCDPDG
RLMIHSTKMYPTEDCTLFVVLGRVMSGTLEAGQRVRVLGEAYSRTDEEDSRVLTVGRLWI
SEARYSIELNRVPAGNWVLIEGIDRPIVKTSTITDLNNTEELHIFRPLKFNTQSVIKIAV
EPVNPSELPKMLDGLRKVNKSYPLLGTKVEESGEHVVLGTGELYLDCAMHDLRRMYSEID
IKVADPVVAFAETVVETSSLKCFAETPNKRNKLTMIAEPLEKGLAEDIEAEHVRITWNKK
RLGEFFQTKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKTLLNSARDAIVQGFQW
GTREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYL
FVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQ
GQAFCLSEFHHWQIVPGDPLDKSITIRPLEPQPATHLAREFMLKTRRRKGLSEDVSINKF
FDDPMLLELARQDVLLNYPL
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgatttgtacgatgagtttgggaattatattggtcctgacttggcttcagag
agtgaagatgaaaatgaatacggtaatgttggcgatgacgccgaggacagagaacgttct
gacgaagaaatggaagaagataaagatgaatcacgagaacagacagaacaaggatcatcc
atgacggttgtgttgcacgaagataaacgatattatcccagtgcattggaagtatatgga
cctgaggtagaaacacttgtgcaagaagaagatgcccaaccgctagataaaccactaata
gcacccactaagaaagcaaagtttcaaataaaacagcaacagttgcctgaaacaacatac
agcattgaatttttagcagatatgatggatgctcctcatctgatcagaaatgtagtcttg
ctgggccatcttcatcatggcaaaactactttggtagattgtttagttcaacaaacacat
ccttatttgcacagcataactgatgaaaaaccacttaggtacacagacacgttgtttact
gagcaacaaagaggcgtttccacgaaagctactcctgttactctcttgcttcaagatgtc
aaatctaagtcttatcttttgaatatatttgatacaccgggtcacgtaaatttttctgac
gaggcgactgccgcaattcggctgtcggatggtgcgatacttattgttgatgcagcggaa
ggtgtaatgttgaacactgagcgtctgttgaagcacgcgcttcaggaaaagctcgctctg
acggtttgcataaacaaaattgatcgtttggttctggaattgaaattgccgccgttggat
gcttattacaaattgcgacatatcatcgaagaaatcaacggactgatagcgatgtactcg
gatacggaaaatcccgcttttgtttctcccgctgtcggaaacgtttgtttcgccagttcc
gaatacaatgtttgtttcacgcttaaatcattcgctgcgctatacgctaagacttatccc
gatctcaatttcaacgagtttgccaaacggctgtggggtgatatttattttaattctaaa
acgcgaaagtttaccaaaaaacctccacacaacaccgcacagcgaagttttattgagttc
attttggagcctctttacaaaatatttgcgcaagtcgttggcgatgtggatacaacatta
cccgatgttctggatgaactcggcatacgattaacttctgaggagatgaagatgaatata
cggccgctgctgaggctcgtctgcacgcgattcttaggagatatgtgcgggttggttgat
atgtgtgttactcacgtgcctagtccgcaagcacacgcttccactaaagtacaacatgtt
tatactggtccgatagattcaccacttgcacaggacatggttaattgcgatccggacgga
agactgatgatccacagtacaaagatgtatccaactgaagattgcaccttgttcgtagta
ctcggtagagtaatgtctggcacgttagaagcgggacaacgcgttcgcgtgctaggcgaa
gcgtattcgcgtacggacgaggaggattcgcgcgttctcacagtgggcaggctgtggatc
agcgaggctcgttactcgatcgagctaaatcgagtacccgccggcaattgggttctcata
gaaggtatcgatcgaccgatcgtgaagaccagcaccatcacagacctcaataatacagag
gagctacatatcttccgcccgttaaagtttaacacgcagagcgtcatcaaaatcgccgta
gagcctgttaatccttctgaactgcccaaaatgttggacggtctacgaaaagtgaacaag
agctatcctttgctgggcacgaaagtggaggagagcggcgaacacgtcgtgttgggaact
ggtgagctgtatctcgattgtgccatgcacgaccttcggcgtatgtattcagaaattgac
ataaaggtcgccgacccggttgtcgctttcgcggagaccgtagtggaaacgagctctctc
aaatgtttcgccgagacgccgaataaacgaaacaagttgacgatgatagcagagccgcta
gaaaagggtcttgccgaagatatagaggctgaacatgtccgcattacttggaataaaaag
agattaggagaatttttccaaaccaagtacgattgggatttgctagcagcgcgaagcata
tgggcgttcggtccggactccacgggaccaaatattttggtggatgacactttgccttct
gaagtagataaaacattgttgaacagcgcgcgcgatgctatcgttcaaggctttcagtgg
ggaactcgcgaaggaccgttatgcgaagaacctatacgaaatgtcaaattcaagatcctc
gacgcagtcatcgcgcaagaaccgttgcatcgaggaggtggtcagatcattccaactgct
cggcgtgtcgcgtattccgcttttctcatggcaaccccacggttgatggaaccgtattta
ttcgtcgaggtgcaagcacccgcggactgcgtatccgccgtttacactgttctggcgaaa
cggcgaggtcacgtaacgcaagacgcgccggtgccaggcagtcctttatacacgatcaag
gcctttataccggcgatcgatagttttggcttcgaaacagatctacgaacccacactcaa
ggacaagcgttctgcctgtccgagtttcatcattggcagatcgtgcccggagatccgctc
gacaaaagtattaccatccgaccgttggagccacaaccggctactcacttagccagagaa
tttatgttgaagactcgaagacgaaagggtctctccgaagacgtttccatcaacaaattc
ttcgacgatcctatgctgctcgaattagcgcgacaggatgtattgttaaattatcctctc
taa
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