Pseudochaenichthys georgianus (South Georgia icefish): 117439933
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Entry
117439933 CDS
T09629
Symbol
dse
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pgeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117439933 (dse)
Enzymes [BR:
pgeo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
117439933 (dse)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4962
CobN-Mg_chel
Motif
Other DBs
NCBI-GeneID:
117439933
NCBI-ProteinID:
XP_033931966
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All DBs
Position
24:2708533..2737005
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AA seq
960 aa
AA seq
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MRTHTLGAPTVVFISLLWPLLAVLDVGAAAEVDPSEGIPFMGGNYNGHPMLYFNRAEVEE
LQYAAGGTHSDMARRIREAGETMLERPELYLPPWSPAEFSARWNELYGNNLGVLSMFCLL
YPHRAGALDLAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYEFLNKGQQE
RFLQVIGNASRLMYEKSYVRGWGFQYLHNHQPTNCVALLTGSLVYMTQGYLQEAYLWTKQ
VLSIMEKSMVLLQDVTDGSLYEGVAYGTYTTRSLFQYMFLVQRHFSISHFDHPWLLQHFA
FLYRTVLPGFQRTVAIADSNYNWFYGPESQLVFLDRYVLRNGSGNWLADVIHQNRVMEGP
GQAGKGQRWCTLHTEFIWYDPGLFPKPPSDFGTSQLHHFEDWGVVTYGSALPADTNRTFL
SFKAGKLGGRAIFDIVHKNKYKEWIKGWRNFNAGHEHPDQNTFTFVPNGVPFITEALYGP
KYTLLNNALLFSSDVPGSCFKPWAGQVTEACDSKWLKYKVGLAADAQGRVEAAMERQGMV
FIRGEGHSSYSPELKIRSFQRNLLLLHPQLLLLVDHIHLEPDSPTRAMSAFFHNTELPFR
STKIDGVHGAFVSHGEDNYKMFWMDDTGYSSKGVVGYWNYPRGYPYNGSNYVNVTMPLRY
PHTRVAYIFYGPGVDVQSFSLRGDDQRVDIYLSTKEHTYTIYLLTGEVPSKPLFAMVLED
HKKIVFEKSAAAEEDSSPEEVEEYVNVVEDNLQHVKPVFQQMERHILGRVLNTASFRKTA
ERLLQFSDKKKTEEVIENMFAMSKTQGRGKGGRTVNLGEKLSETLPDIFAQVEVNEKKAR
QKTSKRTDEDSPEEGEGDSRAFMDYTDGRKNRKGAFVKGRKFKEVQMVATEGSEGLSSTA
SYIRLFLLLNTATFFLLLAVLLTRFQRGRSLHTQRWFYTILLIDCFILLYLYSSCSHSQC
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgagaacacacaccctcggggcccccacagtcgtcttcataagtctgctgtggcccctg
ctcgccgtgctggacgtgggggcggcggcggaagtggaccccagcgaaggaatccccttc
atgggggggaactacaacggtcaccccatgctgtacttcaaccgggcggaggtggaggag
ctgcagtacgcggcgggggggactcacagcgacatggcgaggaggatccgtgaggcgggg
gagaccatgctggagcgtccggagctgtacctgcccccctggagccccgccgagttcagc
gcccgctggaacgagctgtacgggaacaacctgggggtgctgtccatgttctgcctgctc
tacccccaccgggcgggggccctcgacctcgccaaggactacatggagaggatggcggct
cagcctagttggttggtgaaagacgccccctgggacgaggttcccttggcgcactctttg
gtggggttcgccactgcctacgacttcctgtacgagttcctgaacaagggccagcaggag
cgcttcctgcaggtgatcggcaacgcgtcgcgcctcatgtacgagaagtcgtacgtccgt
gggtggggcttccagtacctgcacaaccaccagcccaccaactgcgtggcgctgctcaca
gggagcctggtctacatgacccaaggctacctgcaggaggcctacctgtggaccaagcag
gtgctgtccatcatggagaagtccatggtgctgctgcaggacgtgacggacggctccctg
tatgagggcgtggcctacgggacctacaccacccgctccctgttccagtacatgttcctg
gtgcagcgccacttctccatcagccacttcgaccacccctggctgctgcagcacttcgcc
ttcctgtaccgaaccgtcctgccaggatttcagcggacggtggccattgcagattctaac
tacaactggttctacgggccagagagccagctggtcttcttggaccgctatgtgttgcgt
aacggcagtgggaactggctggcagatgtgatccatcagaacagggtgatggaggggcca
gggcaggcggggaaaggccagcgatggtgtaccctccacacagagttcatctggtatgat
ccaggactgtttccgaagcctccatcagatttcggaacatctcaacttcaccactttgag
gactggggggtggtgacgtatggcagcgctctacctgcagacaccaaccgcacctttctg
tccttcaaggcggggaagctgggggggcgggccatcttcgacatcgttcacaagaacaag
tacaaggagtggatcaaagggtggaggaactttaacgctggccacgagcaccctgatcag
aacactttcacctttgtgcccaacggggtcccgttcatcacagaggctctgtatggaccc
aagtacactctgctgaacaacgcgctcttgttcagctctgatgtcccagggagctgcttc
aagccgtgggctggacaggtgaccgaggcctgcgactccaagtggttgaagtacaaggtg
gggctggcggcggatgcccagggcagagtggaggctgccatggagaggcagggcatggtc
ttcatccgaggggagggacattcctcgtacagtcccgagctgaagatcaggagcttccag
aggaacctgctccttctccacccacagctcctgctcctggtggaccacatccacctggag
ccggacagccccaccagggcgatgagtgccttcttccacaacacggagctgccattccgg
agtaccaagatagatggtgttcatggagccttcgtatcccacggggaggataactacaag
atgttctggatggatgacaccggctacagtagcaaaggggtggtgggttactggaactac
cctcgaggctacccgtacaacggctccaactatgtgaacgtcactatgccattgaggtac
cctcacaccagggttgcctacattttctatggaccaggcgtggatgtacagagcttcagc
ctgcgtggcgatgaccagagggtggacatctacctgtccaccaaggagcacacctacacc
atctacctgctgaccggagaggtccccagcaagcccctgttcgccatggtgctggaggac
cacaagaagatcgtgttcgagaagtctgcggcggctgaggaggacagctcccccgaggaa
gtggaggaatacgtcaacgtggtggaggacaacctacaacacgtcaagcccgtcttccag
cagatggagagacacatcctgggacgggttctcaacaccgccagcttcagaaagactgca
gagcgcctgctccagttctcagacaagaagaagacggaggaggtcatagagaatatgttt
gctatgtccaagacgcagggcagggggaaaggggggaggaccgtgaaccttggggagaag
ctgtctgagactctacctgacattttcgcacaggttgaggtgaatgagaagaaggcgaga
cagaagacttcaaagcgtacagatgaggacagtccagaggagggggagggcgactcgcgg
gcctttatggattataccgacggtcgcaaaaacagaaagggggcttttgtcaagggccgc
aaatttaaggaggttcagatggtggccacggaggggagcgagggtctctccagcaccgcc
tcctacatccgcctcttcctcctgctgaacacggccaccttcttcctgctgctggccgtg
ctgctgacccgcttccagagggggcgcagtctgcacacgcagagatggttctacaccatc
cttctgatcgactgcttcatcctgctgtacctctactcctcctgctctcactcgcagtgt
taa
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